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CYC1_YEAST
ID   CYC1_YEAST              Reviewed;         109 AA.
AC   P00044; D6VWL9;
DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 2.
DT   03-AUG-2022, entry version 227.
DE   RecName: Full=Cytochrome c isoform 1;
DE            Short=Iso-1-cytochrome c;
DE   AltName: Full=Cytochrome c aerobic isoform;
GN   Name=CYC1; OrderedLocusNames=YJR048W; ORFNames=J1653;
OS   Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=559292;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=222467; DOI=10.1016/0092-8674(79)90091-6;
RA   Smith M., Leung D.W., Gillam S., Astell C.R., Montgomery D.L., Hall B.D.;
RT   "Sequence of the gene for iso-1-cytochrome c in Saccharomyces cerevisiae.";
RL   Cell 16:753-761(1979).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RX   PubMed=6273415; DOI=10.1016/s0021-9258(18)42989-4;
RA   Boss J.M., Gillam S., Ziotmer R.S., Smith M.;
RT   "Sequence of the yeast iso-1-cytochrome c mRNA.";
RL   J. Biol. Chem. 256:12958-12961(1981).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=2158927; DOI=10.1016/0378-1119(90)90297-5;
RA   Melnick L., Sherman F.;
RT   "Nucleotide sequence of the COR region: a cluster of six genes in the yeast
RT   Saccharomyces cerevisiae.";
RL   Gene 87:157-166(1990).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=7975898; DOI=10.1002/yea.320100611;
RA   Huang M.-E., Manus V., Chuat J.-C., Galibert F.;
RT   "Revised nucleotide sequence of the COR region of yeast Saccharomyces
RT   cerevisiae chromosome X.";
RL   Yeast 10:811-818(1994).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=8641269; DOI=10.1002/j.1460-2075.1996.tb00557.x;
RA   Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C.,
RA   Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D.,
RA   Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J.,
RA   Heumann K., Hilger F., Hollenberg C.P., Huang M.-E., Jacq C.,
RA   Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E.,
RA   Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T.,
RA   Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B.,
RA   Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R.,
RA   Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N.,
RA   To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H.,
RA   von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.;
RT   "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X.";
RL   EMBO J. 15:2031-2049(1996).
RN   [6]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=24374639; DOI=10.1534/g3.113.008995;
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.;
RT   "The reference genome sequence of Saccharomyces cerevisiae: Then and now.";
RL   G3 (Bethesda) 4:389-398(2014).
RN   [7]
RP   PROTEIN SEQUENCE OF 2-109.
RC   STRAIN=Oviformis;
RX   PubMed=5771953;
RA   Narita K., Titani K.;
RT   "The complete amino acid sequence in baker's yeast cytochrome c.";
RL   J. Biochem. 65:259-267(1969).
RN   [8]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-22.
RX   PubMed=3009831; DOI=10.1016/0022-2836(86)90439-0;
RA   McNeil J.B., Smith M.;
RT   "Transcription initiation of the Saccharomyces cerevisiae iso-1-cytochrome
RT   c gene. Multiple, independent T-A-T-A sequences.";
RL   J. Mol. Biol. 187:363-378(1986).
RN   [9]
RP   PROTEIN SEQUENCE OF 2-5, AND SUBCELLULAR LOCATION.
RX   PubMed=9866716; DOI=10.1006/abio.1998.2863;
RA   Martin H., Eckerskorn C., Gaertner F., Rassow J., Lottspeich F.,
RA   Pfanner N.;
RT   "The yeast mitochondrial intermembrane space: purification and analysis of
RT   two distinct fractions.";
RL   Anal. Biochem. 265:123-128(1998).
RN   [10]
RP   SYNTHESIS.
RX   PubMed=4348687; DOI=10.1002/bip.1973.360120405;
RA   Moroder L., Marchiori F., Borin G., Scoffone E.;
RT   "Studies on cytochrome c. 8. Synthesis of the protected hexadecapeptide
RT   (sequence 93-108) of Baker's yeast iso-1-cytochrome c.";
RL   Biopolymers 12:729-750(1973).
RN   [11]
RP   METHYLATION.
RX   PubMed=2822698; DOI=10.1016/s0021-9258(18)47852-0;
RA   Park K.S., Frost B., Tuck M., Ho L.L., Kim S., Paik W.K.;
RT   "Enzymatic methylation of in vitro synthesized apocytochrome c enhances its
RT   transport into mitochondria.";
RL   J. Biol. Chem. 262:14702-14708(1987).
RN   [12]
RP   FUNCTION.
RX   PubMed=7851399; DOI=10.1111/j.1432-1033.1995.tb20388.x;
RA   Geier B.M., Schagger H., Ortwein C., Link T.A., Hagen W.R., Brandt U.,
RA   Von Jagow G.;
RT   "Kinetic properties and ligand binding of the eleven-subunit cytochrome-c
RT   oxidase from Saccharomyces cerevisiae isolated with a novel large-scale
RT   purification method.";
RL   Eur. J. Biochem. 227:296-302(1995).
RN   [13]
RP   FUNCTION.
RX   PubMed=7814361; DOI=10.1074/jbc.270.1.110;
RA   Allen L.A., Zhao X.J., Caughey W., Poyton R.O.;
RT   "Isoforms of yeast cytochrome c oxidase subunit V affect the binuclear
RT   reaction center and alter the kinetics of interaction with the isoforms of
RT   yeast cytochrome c.";
RL   J. Biol. Chem. 270:110-118(1995).
RN   [14]
RP   INDUCTION.
RX   PubMed=9169434; DOI=10.1074/jbc.272.23.14705;
RA   Burke P.V., Raitt D.C., Allen L.A., Kellogg E.A., Poyton R.O.;
RT   "Effects of oxygen concentration on the expression of cytochrome c and
RT   cytochrome c oxidase genes in yeast.";
RL   J. Biol. Chem. 272:14705-14712(1997).
RN   [15]
RP   METHYLATION AT LYS-79.
RX   PubMed=10821864; DOI=10.1074/jbc.275.21.16127;
RA   Kluck R.M., Ellerby L.M., Ellerby H.M., Naiem S., Yaffe M.P.,
RA   Margoliash E., Bredesen D., Mauk A.G., Sherman F., Newmeyer D.D.;
RT   "Determinants of cytochrome c pro-apoptotic activity. The role of lysine 72
RT   trimethylation.";
RL   J. Biol. Chem. 275:16127-16133(2000).
RN   [16]
RP   METHYLATION AT LYS-78, AND MUTAGENESIS OF LYS-78.
RX   PubMed=10791961; DOI=10.1074/jbc.m001891200;
RA   Polevoda B., Martzen M.R., Das B., Phizicky E.M., Sherman F.;
RT   "Cytochrome c methyltransferase, Ctm1p, of yeast.";
RL   J. Biol. Chem. 275:20508-20513(2000).
RN   [17]
RP   LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
RX   PubMed=14562106; DOI=10.1038/nature02046;
RA   Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N.,
RA   O'Shea E.K., Weissman J.S.;
RT   "Global analysis of protein expression in yeast.";
RL   Nature 425:737-741(2003).
RN   [18]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP   ANALYSIS].
RX   PubMed=22984289; DOI=10.1074/mcp.m112.021105;
RA   Voegtle F.N., Burkhart J.M., Rao S., Gerbeth C., Hinrichs J.,
RA   Martinou J.C., Chacinska A., Sickmann A., Zahedi R.P., Meisinger C.;
RT   "Intermembrane space proteome of yeast mitochondria.";
RL   Mol. Cell. Proteomics 11:1840-1852(2012).
RN   [19]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA   Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA   Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E., Timmerman E.,
RA   Prieto J., Arnesen T., Sherman F., Gevaert K., Aldabe R.;
RT   "N-terminal acetylome analyses and functional insights of the N-terminal
RT   acetyltransferase NatB.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
RN   [20]
RP   X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS).
RX   PubMed=2832611; DOI=10.1016/0022-2836(88)90315-4;
RA   Louie G.V., Hutcheon W.L., Brayer G.D.;
RT   "Yeast iso-1-cytochrome c. A 2.8-A resolution three-dimensional structure
RT   determination.";
RL   J. Mol. Biol. 199:295-314(1988).
RN   [21]
RP   X-RAY CRYSTALLOGRAPHY (1.23 ANGSTROMS).
RX   PubMed=2166169; DOI=10.1016/0022-2836(90)90197-t;
RA   Louie G.V., Brayer G.D.;
RT   "High-resolution refinement of yeast iso-1-cytochrome c and comparisons
RT   with other eukaryotic cytochromes c.";
RL   J. Mol. Biol. 214:527-555(1990).
RN   [22]
RP   X-RAY CRYSTALLOGRAPHY (2.97 ANGSTROMS) IN COMPLEX WITH HEME, AND
RP   METHYLATION AT LYS-78.
RX   PubMed=11880631; DOI=10.1073/pnas.052704699;
RA   Lange C., Hunte C.;
RT   "Crystal structure of the yeast cytochrome bc1 complex with its bound
RT   substrate cytochrome c.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:2800-2805(2002).
RN   [23]
RP   STRUCTURE BY NMR.
RX   PubMed=8901521; DOI=10.1021/bi961110e;
RA   Baistrocchi P., Banci L., Bertini I., Turano P., Bren K.L., Gray H.B.;
RT   "Three-dimensional solution structure of Saccharomyces cerevisiae reduced
RT   iso-1-cytochrome c.";
RL   Biochemistry 35:13788-13796(1996).
RN   [24]
RP   STRUCTURE BY NMR.
RX   PubMed=9220987; DOI=10.1021/bi963025c;
RA   Banci L., Bertini I., Bren K.L., Gray H.B., Sompornpisut P., Turano P.;
RT   "Solution structure of oxidized Saccharomyces cerevisiae iso-1-cytochrome
RT   c.";
RL   Biochemistry 36:8992-9001(1997).
RN   [25]
RP   X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF 2-109 IN THE BC1 COMPLEX, AND
RP   METHYLATION AT LYS-79.
RX   PubMed=18390544; DOI=10.1074/jbc.m710126200;
RA   Solmaz S.R., Hunte C.;
RT   "Structure of complex III with bound cytochrome c in reduced state and
RT   definition of a minimal core interface for electron transfer.";
RL   J. Biol. Chem. 283:17542-17549(2008).
CC   -!- FUNCTION: Electron carrier protein. The oxidized form of the cytochrome
CC       c heme group can accept an electron from the heme group of the
CC       cytochrome c1 subunit of ubiquinol-cytochrome c oxidoreductase.
CC       Cytochrome c then transfers this electron to the dinuclear copper A
CC       center (CU(A)) of the COX2 subunit of cytochrome oxidase, the final
CC       protein carrier in the mitochondrial electron-transport chain. Isoform
CC       1 (CYC1) is the predominant cytochrome c during aerobic/normoxic
CC       growth. {ECO:0000269|PubMed:7814361, ECO:0000269|PubMed:7851399,
CC       ECO:0000269|PubMed:9169434}.
CC   -!- COFACTOR:
CC       Name=heme c; Xref=ChEBI:CHEBI:61717;
CC         Evidence={ECO:0000269|PubMed:18390544};
CC       Note=Binds 1 heme c group covalently per subunit.
CC       {ECO:0000269|PubMed:18390544};
CC   -!- INTERACTION:
CC       P00044; P00431: CCP1; NbExp=4; IntAct=EBI-5393, EBI-4389;
CC   -!- SUBCELLULAR LOCATION: Mitochondrion intermembrane space
CC       {ECO:0000269|PubMed:22984289, ECO:0000269|PubMed:9866716}.
CC   -!- INDUCTION: By oxygen at the level of transcription. Expression drops
CC       rapidly when the oxygen concentration falls below 0.5 uM O(2).
CC       {ECO:0000269|PubMed:9169434}.
CC   -!- PTM: Methylation may enhance its transport into mitochondria.
CC       Methylation occurs in fungi, plants, and some protozoa, but not in
CC       animals. The precise role of methylation at Lys-79 is unknown, but it
CC       seems to preclude pro-apoptotic activity, possibly by lowering affinity
CC       for APAF1. {ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:10821864,
CC       ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:2822698}.
CC   -!- MISCELLANEOUS: Present with 7330 molecules/cell in log phase SD medium.
CC       {ECO:0000269|PubMed:14562106}.
CC   -!- SIMILARITY: Belongs to the cytochrome c family. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Protein Spotlight; Note=Life shuttle - Issue 76 of
CC       November 2006;
CC       URL="https://web.expasy.org/spotlight/back_issues/076";
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DR   EMBL; M37696; AAB59344.1; -; Genomic_DNA.
DR   EMBL; V01298; CAA24605.1; -; Genomic_DNA.
DR   EMBL; L26347; AAA62856.1; -; Genomic_DNA.
DR   EMBL; L36344; AAA88751.1; -; Genomic_DNA.
DR   EMBL; Z49548; CAA89576.1; -; Genomic_DNA.
DR   EMBL; X03472; CAA27189.1; -; Genomic_DNA.
DR   EMBL; BK006943; DAA08835.1; -; Genomic_DNA.
DR   PIR; A00037; CCBY.
DR   RefSeq; NP_012582.1; NM_001181706.1.
DR   PDB; 1CHH; X-ray; 1.97 A; A=2-107.
DR   PDB; 1CHI; X-ray; 2.00 A; A=2-107.
DR   PDB; 1CHJ; X-ray; 1.90 A; A=2-107.
DR   PDB; 1CIE; X-ray; 1.80 A; A=2-107.
DR   PDB; 1CIF; X-ray; 1.90 A; A=2-107.
DR   PDB; 1CIG; X-ray; 1.80 A; A=2-107.
DR   PDB; 1CIH; X-ray; 1.80 A; A=2-107.
DR   PDB; 1CRG; X-ray; 2.00 A; A=2-107.
DR   PDB; 1CRH; X-ray; 1.90 A; A=2-109.
DR   PDB; 1CRI; X-ray; 2.00 A; A=2-107.
DR   PDB; 1CRJ; X-ray; 2.05 A; A=2-107.
DR   PDB; 1CSU; X-ray; 1.81 A; A=2-107.
DR   PDB; 1CSV; X-ray; 1.90 A; A=2-107.
DR   PDB; 1CSW; X-ray; 1.90 A; A=2-107.
DR   PDB; 1CSX; X-ray; 1.90 A; A=2-107.
DR   PDB; 1CTY; X-ray; 2.20 A; A=2-107.
DR   PDB; 1CTZ; X-ray; 1.90 A; A=2-107.
DR   PDB; 1FHB; NMR; -; A=2-107.
DR   PDB; 1IRV; X-ray; 1.90 A; A=2-107.
DR   PDB; 1IRW; X-ray; 2.00 A; A=2-107.
DR   PDB; 1KYO; X-ray; 2.97 A; W=2-109.
DR   PDB; 1LMS; NMR; -; A=2-107.
DR   PDB; 1NMI; NMR; -; A=2-107.
DR   PDB; 1RAP; X-ray; 2.25 A; A=2-109.
DR   PDB; 1RAQ; X-ray; 1.90 A; A=2-109.
DR   PDB; 1S6V; X-ray; 1.88 A; B/D=2-107.
DR   PDB; 1U74; X-ray; 2.40 A; B/D=2-107.
DR   PDB; 1YCC; X-ray; 1.23 A; A=2-109.
DR   PDB; 1YFC; NMR; -; A=2-107.
DR   PDB; 1YIC; NMR; -; A=2-107.
DR   PDB; 2B0Z; X-ray; 2.70 A; B=2-109.
DR   PDB; 2B10; X-ray; 2.80 A; B/D=2-109.
DR   PDB; 2B11; X-ray; 2.30 A; B/D=2-109.
DR   PDB; 2B12; X-ray; 3.02 A; B=2-109.
DR   PDB; 2BCN; X-ray; 1.70 A; B=2-107.
DR   PDB; 2GB8; NMR; -; B=2-109.
DR   PDB; 2HV4; NMR; -; A=2-107.
DR   PDB; 2JQR; NMR; -; A=2-107.
DR   PDB; 2JTI; NMR; -; B=2-109.
DR   PDB; 2LIR; NMR; -; A=2-107.
DR   PDB; 2LIT; NMR; -; A=2-107.
DR   PDB; 2MHM; NMR; -; A=2-107.
DR   PDB; 2N18; NMR; -; B=3-107, C=2-109.
DR   PDB; 2ORL; NMR; -; A=2-107.
DR   PDB; 2PCC; X-ray; 2.30 A; B/D=2-109.
DR   PDB; 2YCC; X-ray; 1.90 A; A=2-107.
DR   PDB; 3CX5; X-ray; 1.90 A; W=2-109.
DR   PDB; 3TYI; X-ray; 1.40 A; A/B=2-107.
DR   PDB; 4MU8; X-ray; 1.45 A; A/B=2-107.
DR   PDB; 4N0K; X-ray; 1.05 A; A/B=2-107.
DR   PDB; 4P4Q; X-ray; 2.01 A; B/D=7-109.
DR   PDB; 4Q5P; X-ray; 1.87 A; A/B/C=4-107.
DR   PDB; 4QAO; X-ray; 2.10 A; A/B/C=4-107.
DR   PDB; 4YE1; X-ray; 1.39 A; A/B=2-109.
DR   PDB; 5CIB; X-ray; 3.01 A; B/D=2-109.
DR   PDB; 5CIC; X-ray; 2.10 A; B/D=2-109.
DR   PDB; 5CID; X-ray; 2.76 A; B/D=2-109.
DR   PDB; 5CIE; X-ray; 2.60 A; B/D=2-109.
DR   PDB; 5CIF; X-ray; 2.01 A; B/D=7-109.
DR   PDB; 5CIG; X-ray; 2.06 A; B/D=2-109.
DR   PDB; 5CIH; X-ray; 2.60 A; B/D=7-109.
DR   PDB; 5KKE; X-ray; 1.70 A; A=2-107.
DR   PDB; 5KLU; X-ray; 1.99 A; A/B=4-107.
DR   PDB; 5KPF; X-ray; 1.70 A; A/B=3-109.
DR   PDB; 5LFT; X-ray; 1.25 A; A=3-109.
DR   PDB; 5LYC; X-ray; 1.80 A; A/B=3-109.
DR   PDB; 5NCV; X-ray; 1.50 A; A/B=3-109.
DR   PDB; 5T7H; X-ray; 2.00 A; A/B/C/D=1-107.
DR   PDB; 5T8W; X-ray; 1.60 A; A/B=2-109.
DR   PDB; 6EGY; X-ray; 2.70 A; A/B=2-109.
DR   PDB; 6EGZ; X-ray; 2.17 A; A/B=2-109.
DR   PDB; 6GD6; X-ray; 1.20 A; A=3-109.
DR   PDB; 6GD7; X-ray; 1.55 A; A=3-109.
DR   PDB; 6GD8; X-ray; 2.50 A; A/B/C/D=3-109.
DR   PDB; 6GD9; X-ray; 2.65 A; A=3-109.
DR   PDB; 6GDA; X-ray; 2.80 A; A=3-109.
DR   PDB; 6P41; X-ray; 2.90 A; B/D=7-109.
DR   PDB; 6P42; X-ray; 2.90 A; B/D=7-109.
DR   PDB; 6P43; X-ray; 1.91 A; B=2-109.
DR   PDB; 6RGI; X-ray; 2.64 A; A=3-109.
DR   PDB; 6RSI; X-ray; 2.48 A; A=3-109.
DR   PDB; 6RSJ; X-ray; 2.27 A; A=3-109.
DR   PDB; 6RSK; X-ray; 2.31 A; A/B=3-109.
DR   PDB; 6RSL; X-ray; 1.99 A; A/B=3-109.
DR   PDB; 6S8Y; X-ray; 2.09 A; A=3-109.
DR   PDB; 6SUY; X-ray; 1.75 A; A/B=2-109.
DR   PDB; 6Y0J; X-ray; 2.70 A; A/B/C/D=3-109.
DR   PDB; 7BBT; X-ray; 3.02 A; A/B/C/D=3-109.
DR   PDB; 7PR2; X-ray; 1.73 A; A/B=3-109.
DR   PDB; 7PR3; X-ray; 2.37 A; A/B/C/D=3-109.
DR   PDB; 7PR4; X-ray; 1.32 A; A=3-109.
DR   PDBsum; 1CHH; -.
DR   PDBsum; 1CHI; -.
DR   PDBsum; 1CHJ; -.
DR   PDBsum; 1CIE; -.
DR   PDBsum; 1CIF; -.
DR   PDBsum; 1CIG; -.
DR   PDBsum; 1CIH; -.
DR   PDBsum; 1CRG; -.
DR   PDBsum; 1CRH; -.
DR   PDBsum; 1CRI; -.
DR   PDBsum; 1CRJ; -.
DR   PDBsum; 1CSU; -.
DR   PDBsum; 1CSV; -.
DR   PDBsum; 1CSW; -.
DR   PDBsum; 1CSX; -.
DR   PDBsum; 1CTY; -.
DR   PDBsum; 1CTZ; -.
DR   PDBsum; 1FHB; -.
DR   PDBsum; 1IRV; -.
DR   PDBsum; 1IRW; -.
DR   PDBsum; 1KYO; -.
DR   PDBsum; 1LMS; -.
DR   PDBsum; 1NMI; -.
DR   PDBsum; 1RAP; -.
DR   PDBsum; 1RAQ; -.
DR   PDBsum; 1S6V; -.
DR   PDBsum; 1U74; -.
DR   PDBsum; 1YCC; -.
DR   PDBsum; 1YFC; -.
DR   PDBsum; 1YIC; -.
DR   PDBsum; 2B0Z; -.
DR   PDBsum; 2B10; -.
DR   PDBsum; 2B11; -.
DR   PDBsum; 2B12; -.
DR   PDBsum; 2BCN; -.
DR   PDBsum; 2GB8; -.
DR   PDBsum; 2HV4; -.
DR   PDBsum; 2JQR; -.
DR   PDBsum; 2JTI; -.
DR   PDBsum; 2LIR; -.
DR   PDBsum; 2LIT; -.
DR   PDBsum; 2MHM; -.
DR   PDBsum; 2N18; -.
DR   PDBsum; 2ORL; -.
DR   PDBsum; 2PCC; -.
DR   PDBsum; 2YCC; -.
DR   PDBsum; 3CX5; -.
DR   PDBsum; 3TYI; -.
DR   PDBsum; 4MU8; -.
DR   PDBsum; 4N0K; -.
DR   PDBsum; 4P4Q; -.
DR   PDBsum; 4Q5P; -.
DR   PDBsum; 4QAO; -.
DR   PDBsum; 4YE1; -.
DR   PDBsum; 5CIB; -.
DR   PDBsum; 5CIC; -.
DR   PDBsum; 5CID; -.
DR   PDBsum; 5CIE; -.
DR   PDBsum; 5CIF; -.
DR   PDBsum; 5CIG; -.
DR   PDBsum; 5CIH; -.
DR   PDBsum; 5KKE; -.
DR   PDBsum; 5KLU; -.
DR   PDBsum; 5KPF; -.
DR   PDBsum; 5LFT; -.
DR   PDBsum; 5LYC; -.
DR   PDBsum; 5NCV; -.
DR   PDBsum; 5T7H; -.
DR   PDBsum; 5T8W; -.
DR   PDBsum; 6EGY; -.
DR   PDBsum; 6EGZ; -.
DR   PDBsum; 6GD6; -.
DR   PDBsum; 6GD7; -.
DR   PDBsum; 6GD8; -.
DR   PDBsum; 6GD9; -.
DR   PDBsum; 6GDA; -.
DR   PDBsum; 6P41; -.
DR   PDBsum; 6P42; -.
DR   PDBsum; 6P43; -.
DR   PDBsum; 6RGI; -.
DR   PDBsum; 6RSI; -.
DR   PDBsum; 6RSJ; -.
DR   PDBsum; 6RSK; -.
DR   PDBsum; 6RSL; -.
DR   PDBsum; 6S8Y; -.
DR   PDBsum; 6SUY; -.
DR   PDBsum; 6Y0J; -.
DR   PDBsum; 7BBT; -.
DR   PDBsum; 7PR2; -.
DR   PDBsum; 7PR3; -.
DR   PDBsum; 7PR4; -.
DR   AlphaFoldDB; P00044; -.
DR   BMRB; P00044; -.
DR   SMR; P00044; -.
DR   BioGRID; 33801; 135.
DR   DIP; DIP-4265N; -.
DR   IntAct; P00044; 4.
DR   MINT; P00044; -.
DR   STRING; 4932.YJR048W; -.
DR   MoonProt; P00044; -.
DR   MaxQB; P00044; -.
DR   PaxDb; P00044; -.
DR   PRIDE; P00044; -.
DR   EnsemblFungi; YJR048W_mRNA; YJR048W; YJR048W.
DR   GeneID; 853507; -.
DR   KEGG; sce:YJR048W; -.
DR   SGD; S000003809; CYC1.
DR   VEuPathDB; FungiDB:YJR048W; -.
DR   eggNOG; KOG3453; Eukaryota.
DR   GeneTree; ENSGT00940000168884; -.
DR   HOGENOM; CLU_060944_3_0_1; -.
DR   InParanoid; P00044; -.
DR   OMA; AQCHTIN; -.
DR   BioCyc; YEAST:G3O-31683-MON; -.
DR   Reactome; R-SCE-111457; Release of apoptotic factors from the mitochondria.
DR   Reactome; R-SCE-3299685; Detoxification of Reactive Oxygen Species.
DR   Reactome; R-SCE-5620971; Pyroptosis.
DR   Reactome; R-SCE-611105; Respiratory electron transport.
DR   EvolutionaryTrace; P00044; -.
DR   PRO; PR:P00044; -.
DR   Proteomes; UP000002311; Chromosome X.
DR   RNAct; P00044; protein.
DR   GO; GO:0005758; C:mitochondrial intermembrane space; IDA:SGD.
DR   GO; GO:0005739; C:mitochondrion; HDA:SGD.
DR   GO; GO:0070469; C:respirasome; IEA:UniProtKB-KW.
DR   GO; GO:0009055; F:electron transfer activity; IDA:SGD.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006123; P:mitochondrial electron transport, cytochrome c to oxygen; IDA:SGD.
DR   GO; GO:0006122; P:mitochondrial electron transport, ubiquinol to cytochrome c; IDA:SGD.
DR   Gene3D; 1.10.760.10; -; 1.
DR   InterPro; IPR009056; Cyt_c-like_dom.
DR   InterPro; IPR036909; Cyt_c-like_dom_sf.
DR   InterPro; IPR002327; Cyt_c_1A/1B.
DR   PANTHER; PTHR11961; PTHR11961; 1.
DR   Pfam; PF00034; Cytochrom_C; 1.
DR   PRINTS; PR00604; CYTCHRMECIAB.
DR   SUPFAM; SSF46626; SSF46626; 1.
DR   PROSITE; PS51007; CYTC; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Direct protein sequencing; Electron transport; Heme; Iron;
KW   Metal-binding; Methylation; Mitochondrion; Reference proteome;
KW   Respiratory chain; Transport.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000269|PubMed:5771953,
FT                   ECO:0000269|PubMed:9866716"
FT   CHAIN           2..109
FT                   /note="Cytochrome c isoform 1"
FT                   /id="PRO_0000108337"
FT   BINDING         20
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /note="covalent"
FT                   /evidence="ECO:0000269|PubMed:11880631,
FT                   ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO,
FT                   ECO:0007744|PDB:3CX5"
FT   BINDING         23
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /note="covalent"
FT                   /evidence="ECO:0000269|PubMed:11880631,
FT                   ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO,
FT                   ECO:0007744|PDB:3CX5"
FT   BINDING         24
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="axial binding residue"
FT                   /evidence="ECO:0000269|PubMed:11880631,
FT                   ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO,
FT                   ECO:0007744|PDB:3CX5"
FT   BINDING         86
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="axial binding residue"
FT                   /evidence="ECO:0000269|PubMed:11880631,
FT                   ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO,
FT                   ECO:0007744|PDB:3CX5"
FT   MOD_RES         78
FT                   /note="N6,N6,N6-trimethyllysine; by CTM1"
FT                   /evidence="ECO:0000269|PubMed:10791961,
FT                   ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO"
FT   MOD_RES         79
FT                   /note="N6,N6,N6-trimethyllysine"
FT                   /evidence="ECO:0000269|PubMed:10821864,
FT                   ECO:0000269|PubMed:18390544"
FT   MUTAGEN         78
FT                   /note="K->R: Loss of methylation by CTM1."
FT                   /evidence="ECO:0000269|PubMed:10791961"
FT   HELIX           9..19
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   TURN            20..23
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   STRAND          27..29
FT                   /evidence="ECO:0007829|PDB:2PCC"
FT   STRAND          33..35
FT                   /evidence="ECO:0007829|PDB:5LFT"
FT   HELIX           41..43
FT                   /evidence="ECO:0007829|PDB:5KPF"
FT   STRAND          44..47
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   STRAND          49..52
FT                   /evidence="ECO:0007829|PDB:5CID"
FT   HELIX           56..61
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   STRAND          64..66
FT                   /evidence="ECO:0007829|PDB:2MHM"
FT   HELIX           67..75
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   HELIX           77..80
FT                   /evidence="ECO:0007829|PDB:4N0K"
FT   STRAND          81..83
FT                   /evidence="ECO:0007829|PDB:1FHB"
FT   HELIX           84..87
FT                   /evidence="ECO:0007829|PDB:5KKE"
FT   HELIX           94..107
FT                   /evidence="ECO:0007829|PDB:4N0K"
SQ   SEQUENCE   109 AA;  12182 MW;  1F8B6CB3B60C0BE8 CRC64;
     MTEFKAGSAK KGATLFKTRC LQCHTVEKGG PHKVGPNLHG IFGRHSGQAE GYSYTDANIK
     KNVLWDENNM SEYLTNPKKY IPGTKMAFGG LKKEKDRNDL ITYLKKACE
 
 
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