CYC22_RHOPA
ID CYC22_RHOPA Reviewed; 139 AA.
AC P00091;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 16-FEB-2004, sequence version 2.
DT 03-AUG-2022, entry version 148.
DE RecName: Full=Cytochrome c2;
DE Flags: Precursor;
GN Name=cycA; OrderedLocusNames=RPA1535;
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=258594;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA Harrison F.H., Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
RN [2]
RP PROTEIN SEQUENCE OF 26-139.
RC STRAIN=ATCC 17007 / ATH 2.1.37 / NCIB 11774;
RX PubMed=221822; DOI=10.1038/278659a0;
RA Ambler R.P., Daniel M., Hermoso J., Meyer T.E., Bartsch R.G., Kamen M.D.;
RT "Cytochrome c2 sequence variation among the recognised species of purple
RT nonsulphur photosynthetic bacteria.";
RL Nature 278:659-660(1979).
CC -!- FUNCTION: Cytochrome c2 is found mainly in purple, non-sulfur,
CC photosynthetic bacteria where it functions as the electron donor to the
CC oxidized bacteriochlorophyll in the photophosphorylation pathway.
CC However, it may also have a role in the respiratory chain and is found
CC in some non-photosynthetic bacteria.
CC -!- PTM: Binds 1 heme c group covalently per subunit.
CC -!- SIMILARITY: Belongs to the cytochrome c family. {ECO:0000305}.
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DR EMBL; BX572597; CAE26977.1; -; Genomic_DNA.
DR PIR; A00083; CCRF7P.
DR RefSeq; WP_011157096.1; NC_005296.1.
DR PDB; 1FJ0; X-ray; 1.70 A; A/B/C/D=26-139.
DR PDB; 1HH7; X-ray; 1.40 A; A=27-139.
DR PDB; 1I8O; X-ray; 1.15 A; A=26-139.
DR PDB; 1I8P; X-ray; 1.95 A; A/B/C/D=26-139.
DR PDBsum; 1FJ0; -.
DR PDBsum; 1HH7; -.
DR PDBsum; 1I8O; -.
DR PDBsum; 1I8P; -.
DR AlphaFoldDB; P00091; -.
DR SMR; P00091; -.
DR STRING; 258594.RPA1535; -.
DR DrugBank; DB03317; Ferroheme C.
DR DrugBank; DB03088; Pidolic acid.
DR PRIDE; P00091; -.
DR EnsemblBacteria; CAE26977; CAE26977; RPA1535.
DR GeneID; 66892566; -.
DR KEGG; rpa:RPA1535; -.
DR eggNOG; COG3474; Bacteria.
DR HOGENOM; CLU_060944_2_0_5; -.
DR OMA; YSDAMKN; -.
DR PhylomeDB; P00091; -.
DR BioCyc; RPAL258594:TX73_RS07830-MON; -.
DR EvolutionaryTrace; P00091; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.760.10; -; 1.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR002327; Cyt_c_1A/1B.
DR PANTHER; PTHR11961; PTHR11961; 1.
DR Pfam; PF00034; Cytochrom_C; 1.
DR PRINTS; PR00604; CYTCHRMECIAB.
DR SUPFAM; SSF46626; SSF46626; 1.
DR PROSITE; PS51007; CYTC; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Electron transport; Heme; Iron;
KW Metal-binding; Photosynthesis; Pyrrolidone carboxylic acid;
KW Reference proteome; Signal; Transport.
FT SIGNAL 1..25
FT /evidence="ECO:0000269|PubMed:221822"
FT CHAIN 26..139
FT /note="Cytochrome c2"
FT /id="PRO_0000006501"
FT BINDING 38
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT BINDING 41
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT BINDING 42
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT BINDING 118
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT MOD_RES 26
FT /note="Pyrrolidone carboxylic acid"
FT /evidence="ECO:0000250|UniProtKB:P00090"
FT HELIX 28..38
FT /evidence="ECO:0007829|PDB:1I8O"
FT TURN 39..41
FT /evidence="ECO:0007829|PDB:1I8O"
FT STRAND 44..46
FT /evidence="ECO:0007829|PDB:1I8O"
FT STRAND 48..50
FT /evidence="ECO:0007829|PDB:1I8O"
FT HELIX 71..78
FT /evidence="ECO:0007829|PDB:1I8O"
FT HELIX 85..93
FT /evidence="ECO:0007829|PDB:1I8O"
FT HELIX 95..105
FT /evidence="ECO:0007829|PDB:1I8O"
FT HELIX 109..111
FT /evidence="ECO:0007829|PDB:1I8O"
FT HELIX 125..136
FT /evidence="ECO:0007829|PDB:1I8O"
SQ SEQUENCE 139 AA; 14633 MW; 4DCF92466EE609A1 CRC64;
MVKKLLTILS IAATAGSLSI GTASAQDAKA GEAVFKQCMT CHRADKNMVG PALGGVVGRK
AGTAAGFTYS PLNHNSGEAG LVWTADNIIN YLNDPNAFLK KFLTDKGKAD QAVGVTKMTF
KLANEQQRKD VVAYLATLK