CYC2_RHOVT
ID CYC2_RHOVT Reviewed; 125 AA.
AC P00082; E3I2Y7;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 08-FEB-2011, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Cytochrome c2;
DE Flags: Precursor;
GN OrderedLocusNames=Rvan_1007;
OS Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG
OS 4299).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Hyphomicrobiaceae; Rhodomicrobium.
OX NCBI_TaxID=648757;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299;
RX PubMed=21705585; DOI=10.1128/jb.05453-11;
RG US DOE Joint Genome Institute;
RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.;
RT "Genome sequences of eight morphologically diverse alphaproteobacteria.";
RL J. Bacteriol. 193:4567-4568(2011).
RN [2]
RP PROTEIN SEQUENCE OF 22-125.
RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299;
RX PubMed=174109; DOI=10.1073/pnas.73.2.472;
RA Ambler R.P., Meyer T.E., Kamen M.D.;
RT "Primary structure determination of two cytochromes c2: close similarity to
RT functionally unrelated mitochondrial cytochrome C.";
RL Proc. Natl. Acad. Sci. U.S.A. 73:472-475(1976).
CC -!- FUNCTION: Cytochrome c2 is found mainly in purple, non-sulfur,
CC photosynthetic bacteria where it functions as the electron donor to the
CC oxidized bacteriochlorophyll in the photophosphorylation pathway.
CC However, it may also have a role in the respiratory chain and is found
CC in some non-photosynthetic bacteria.
CC -!- PTM: Binds 1 heme c group covalently per subunit.
CC -!- SIMILARITY: Belongs to the cytochrome c family. {ECO:0000305}.
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DR EMBL; CP002292; ADP70281.1; -; Genomic_DNA.
DR PIR; A00074; CCRD2.
DR RefSeq; WP_013418685.1; NC_014664.1.
DR AlphaFoldDB; P00082; -.
DR SMR; P00082; -.
DR STRING; 648757.Rvan_1007; -.
DR EnsemblBacteria; ADP70281; ADP70281; Rvan_1007.
DR KEGG; rva:Rvan_1007; -.
DR eggNOG; COG3474; Bacteria.
DR HOGENOM; CLU_060944_2_1_5; -.
DR OMA; YSDAMKN; -.
DR OrthoDB; 1853490at2; -.
DR Proteomes; UP000001399; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.760.10; -; 1.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR002327; Cyt_c_1A/1B.
DR PANTHER; PTHR11961; PTHR11961; 1.
DR Pfam; PF00034; Cytochrom_C; 1.
DR PRINTS; PR00604; CYTCHRMECIAB.
DR SUPFAM; SSF46626; SSF46626; 1.
DR PROSITE; PS51007; CYTC; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Electron transport; Heme; Iron; Metal-binding;
KW Photosynthesis; Reference proteome; Signal; Transport.
FT SIGNAL 1..21
FT /evidence="ECO:0000269|PubMed:174109"
FT CHAIN 22..125
FT /note="Cytochrome c2"
FT /id="PRO_0000108348"
FT DOMAIN 23..123
FT /note="Cytochrome c"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 35
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT BINDING 38
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT BINDING 39
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT BINDING 101
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT CONFLICT 47
FT /note="P -> N (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 52
FT /note="V -> E (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 55..59
FT /note="NVVGS -> DVFGQ (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 63
FT /note="S -> A (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 118..125
FT /note="FLATQHGQ -> YLKQLSGK (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 125 AA; 13187 MW; 9E8949E84DE2423D CRC64;
MKAIKIAMVG AALVWSASAY AAGDPVKGEQ VFKQCKICHQ VGPTAKPGVG PVQNNVVGSK
AGSRPGFNYS DAMKNSGLTW DEATLDKYLE NPKAVVPGTK MVFVGLKNPQ DRADVIAFLA
TQHGQ