CYC6_LIMMA
ID CYC6_LIMMA Reviewed; 89 AA.
AC P00118;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 21-JUL-1986, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Cytochrome c6;
DE AltName: Full=Cytochrome c-553;
DE AltName: Full=Cytochrome c553;
DE AltName: Full=Soluble cytochrome f {ECO:0000303|PubMed:803642};
GN Name=petJ;
OS Limnospira maxima (Arthrospira maxima).
OC Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales;
OC Sirenicapillariaceae; Limnospira.
OX NCBI_TaxID=129910;
RN [1]
RP PROTEIN SEQUENCE.
RX PubMed=803642; DOI=10.1038/253285a0;
RA Ambler R.P., Bartsch R.G.;
RT "Amino acid sequence similarity between cytochrome f from a blue-green
RT bacterium and algal chloroplasts.";
RL Nature 253:285-288(1975).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) IN COMPLEX WITH HEME, COFACTOR, AND
RP SUBUNIT.
RX PubMed=11478889; DOI=10.1021/bi002679p;
RA Sawaya M.R., Krogmann D.W., Serag A., Ho K.K., Yeates T.O., Kerfeld C.A.;
RT "Structures of cytochrome c-549 and cytochrome c6 from the cyanobacterium
RT Arthrospira maxima.";
RL Biochemistry 40:9215-9225(2001).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (3.5 ANGSTROMS) IN COMPLEX WITH HEME, COFACTOR, AND
RP SUBUNIT.
RX PubMed=12077429; DOI=10.1107/s0907444902006534;
RA Kerfeld C.A., Sawaya M.R., Krogmann D.W., Yeates T.O.;
RT "Structure of cytochrome c6 from Arthrospira maxima: an assembly of 24
RT subunits in a nearly symmetric shell.";
RL Acta Crystallogr. D 58:1104-1110(2002).
CC -!- FUNCTION: Functions as an electron carrier between membrane-bound
CC cytochrome b6-f and photosystem I in oxygenic photosynthesis.
CC {ECO:0000305}.
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Redox potential:
CC E(0) is +314 mV.;
CC -!- SUBUNIT: Monomer. Homodimer, or even higher oligomerization, in crystal
CC structures (PubMed:11478889, PubMed:12077429).
CC {ECO:0000269|PubMed:11478889, ECO:0000269|PubMed:12077429}.
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid lumen {ECO:0000305}.
CC -!- PTM: Binds 1 heme c group covalently per subunit.
CC {ECO:0000269|PubMed:11478889, ECO:0000269|PubMed:12077429}.
CC -!- SIMILARITY: Belongs to the cytochrome c family. PetJ subfamily.
CC {ECO:0000305}.
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DR PIR; A00110; CCSG6.
DR PDB; 1F1F; X-ray; 2.70 A; A=1-89.
DR PDB; 1KIB; X-ray; 3.50 A; A/B/C/D/E/F/G/H=1-89.
DR PDBsum; 1F1F; -.
DR PDBsum; 1KIB; -.
DR AlphaFoldDB; P00118; -.
DR SMR; P00118; -.
DR EvolutionaryTrace; P00118; -.
DR GO; GO:0031979; C:plasma membrane-derived thylakoid lumen; IEA:UniProtKB-SubCell.
DR GO; GO:0009055; F:electron transfer activity; IEA:UniProtKB-UniRule.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.760.10; -; 1.
DR HAMAP; MF_00594; Cytc_PetJ; 1.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR023655; Cyt_C6.
DR InterPro; IPR008168; Cyt_C_IC.
DR PANTHER; PTHR34688; PTHR34688; 1.
DR Pfam; PF13442; Cytochrome_CBB3; 1.
DR PRINTS; PR00605; CYTCHROMECIC.
DR SUPFAM; SSF46626; SSF46626; 1.
DR PROSITE; PS51007; CYTC; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Electron transport; Heme; Iron;
KW Metal-binding; Photosynthesis; Thylakoid; Transport.
FT CHAIN 1..89
FT /note="Cytochrome c6"
FT /id="PRO_0000208686"
FT BINDING 14
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000269|PubMed:11478889,
FT ECO:0000269|PubMed:12077429"
FT BINDING 17
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000269|PubMed:11478889,
FT ECO:0000269|PubMed:12077429"
FT BINDING 18
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000269|PubMed:11478889,
FT ECO:0000269|PubMed:12077429"
FT BINDING 62
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000269|PubMed:11478889,
FT ECO:0000269|PubMed:12077429"
FT HELIX 3..13
FT /evidence="ECO:0007829|PDB:1F1F"
FT HELIX 15..18
FT /evidence="ECO:0007829|PDB:1F1F"
FT HELIX 19..21
FT /evidence="ECO:0007829|PDB:1F1F"
FT STRAND 24..26
FT /evidence="ECO:0007829|PDB:1F1F"
FT HELIX 33..39
FT /evidence="ECO:0007829|PDB:1F1F"
FT TURN 41..45
FT /evidence="ECO:0007829|PDB:1F1F"
FT HELIX 47..57
FT /evidence="ECO:0007829|PDB:1F1F"
FT TURN 66..68
FT /evidence="ECO:0007829|PDB:1F1F"
FT HELIX 71..87
FT /evidence="ECO:0007829|PDB:1F1F"
SQ SEQUENCE 89 AA; 9236 MW; 4796D56B3EA8AF85 CRC64;
GDVAAGASVF SANCAACHMG GRNVIVANKT LSKSDLAKYL KGFDDDAVAA VAYQVTNGKN
AMPGFNGRLS PKQIEDVAAY VVDQAEKGW