CYC6_THEVB
ID CYC6_THEVB Reviewed; 112 AA.
AC P0A3X9; P56534; Q9F1M0;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Cytochrome c6;
DE AltName: Full=Cytochrome c-553;
DE AltName: Full=Cytochrome c553;
DE AltName: Full=Soluble cytochrome f;
DE Flags: Precursor;
GN Name=petJ; OrderedLocusNames=tll1283;
OS Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1).
OC Bacteria; Cyanobacteria; Pseudanabaenales; Thermosynechococcaceae;
OC Thermosynechococcus.
OX NCBI_TaxID=197221;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Katoh H., Itoh S., Shen J.-R., Ikeuchi M.;
RT "Cloning of the genes for cytochrome c550 and a c550-like protein from the
RT thermophilic cyanobacterium Synechococcus elongatus.";
RL Plant Cell Physiol. 40:89-89(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-2133 / IAM M-273 / BP-1;
RX PubMed=12240834; DOI=10.1093/dnares/9.4.123;
RA Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S.,
RA Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C.,
RA Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Sugimoto M.,
RA Takeuchi C., Yamada M., Tabata S.;
RT "Complete genome structure of the thermophilic cyanobacterium
RT Thermosynechococcus elongatus BP-1.";
RL DNA Res. 9:123-130(2002).
CC -!- FUNCTION: Functions as an electron carrier between membrane-bound
CC cytochrome b6-f and photosystem I in oxygenic photosynthesis.
CC {ECO:0000250}.
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid lumen {ECO:0000305}.
CC -!- PTM: Binds 1 heme c group covalently per subunit. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the cytochrome c family. PetJ subfamily.
CC {ECO:0000305}.
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DR EMBL; AB052597; BAB20061.1; -; Genomic_DNA.
DR EMBL; BA000039; BAC08835.1; -; Genomic_DNA.
DR RefSeq; NP_682073.1; NC_004113.1.
DR RefSeq; WP_011057123.1; NC_004113.1.
DR PDB; 6TR1; X-ray; 1.70 A; A/E=26-111, C=26-112.
DR PDB; 6TSY; X-ray; 2.25 A; A/B/C/D/E/F=26-112.
DR PDBsum; 6TR1; -.
DR PDBsum; 6TSY; -.
DR AlphaFoldDB; P0A3X9; -.
DR SMR; P0A3X9; -.
DR STRING; 197221.22295007; -.
DR EnsemblBacteria; BAC08835; BAC08835; BAC08835.
DR KEGG; tel:tll1283; -.
DR PATRIC; fig|197221.4.peg.1350; -.
DR eggNOG; COG2010; Bacteria.
DR OMA; GQNVIMP; -.
DR OrthoDB; 1939800at2; -.
DR Proteomes; UP000000440; Chromosome.
DR GO; GO:0031979; C:plasma membrane-derived thylakoid lumen; IEA:UniProtKB-SubCell.
DR GO; GO:0009055; F:electron transfer activity; IEA:UniProtKB-UniRule.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.760.10; -; 1.
DR HAMAP; MF_00594; Cytc_PetJ; 1.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR023655; Cyt_C6.
DR InterPro; IPR008168; Cyt_C_IC.
DR PANTHER; PTHR34688; PTHR34688; 1.
DR Pfam; PF13442; Cytochrome_CBB3; 1.
DR PRINTS; PR00605; CYTCHROMECIC.
DR SUPFAM; SSF46626; SSF46626; 1.
DR PROSITE; PS51007; CYTC; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Electron transport; Heme; Iron; Metal-binding;
KW Photosynthesis; Reference proteome; Signal; Thylakoid; Transport.
FT SIGNAL 1..25
FT /evidence="ECO:0000250"
FT CHAIN 26..112
FT /note="Cytochrome c6"
FT /id="PRO_0000023857"
FT BINDING 39
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000250"
FT BINDING 42
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000250"
FT BINDING 43
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000250"
FT BINDING 83
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000250"
FT HELIX 28..38
FT /evidence="ECO:0007829|PDB:6TR1"
FT HELIX 40..43
FT /evidence="ECO:0007829|PDB:6TR1"
FT HELIX 44..46
FT /evidence="ECO:0007829|PDB:6TR1"
FT STRAND 49..51
FT /evidence="ECO:0007829|PDB:6TR1"
FT HELIX 58..63
FT /evidence="ECO:0007829|PDB:6TR1"
FT HELIX 69..78
FT /evidence="ECO:0007829|PDB:6TR1"
FT TURN 87..89
FT /evidence="ECO:0007829|PDB:6TR1"
FT HELIX 92..108
FT /evidence="ECO:0007829|PDB:6TR1"
SQ SEQUENCE 112 AA; 11762 MW; F9C2A62E88CB0305 CRC64;
MKKRFISVCA IAIALLVSLT PAALAADLAN GAKVFSGNCA ACHMGGGNVV MANKTLKKEA
LEQFGMYSED AIIYQVQHGK NAMPAFAGRL TDEQIQDVAA YVLDQAAKGW AG