CYCY_RHOCB
ID CYCY_RHOCB Reviewed; 199 AA.
AC Q05389; D5AMF5;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Cytochrome c-type cyt cy;
GN Name=cycY; OrderedLocusNames=RCAP_rcc02501;
OS Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=272942;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=MT1131;
RX PubMed=8385603; DOI=10.1002/j.1460-2075.1993.tb05773.x;
RA Jenney F.E. Jr., Daldal F.;
RT "A novel membrane-associated c-type cytochrome, cyt cy, can mediate the
RT photosynthetic growth of Rhodobacter capsulatus and Rhodobacter
RT sphaeroides.";
RL EMBO J. 12:1283-1292(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=20418398; DOI=10.1128/jb.00366-10;
RA Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V.,
RA Haselkorn R.;
RT "Complete genome sequence of the photosynthetic purple nonsulfur bacterium
RT Rhodobacter capsulatus SB 1003.";
RL J. Bacteriol. 192:3545-3546(2010).
CC -!- FUNCTION: Electron transfer pathways that operates during
CC photosynthesis.
CC -!- SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein.
CC -!- PTM: Binds 1 heme c group covalently per subunit. {ECO:0000305}.
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DR EMBL; Z21797; CAA79860.1; -; Genomic_DNA.
DR EMBL; CP001312; ADE86231.1; -; Genomic_DNA.
DR PIR; S31938; S31938.
DR PDB; 6XKW; EM; 5.20 A; Y=1-199.
DR PDB; 6XKX; EM; 6.10 A; p=31-199.
DR PDB; 6XKZ; EM; 7.20 A; p=31-199.
DR PDBsum; 6XKW; -.
DR PDBsum; 6XKX; -.
DR PDBsum; 6XKZ; -.
DR AlphaFoldDB; Q05389; -.
DR SMR; Q05389; -.
DR STRING; 272942.RCAP_rcc02501; -.
DR EnsemblBacteria; ADE86231; ADE86231; RCAP_rcc02501.
DR KEGG; rcp:RCAP_rcc02501; -.
DR eggNOG; COG3474; Bacteria.
DR HOGENOM; CLU_060944_4_1_5; -.
DR OMA; VDFATIM; -.
DR Proteomes; UP000002361; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0015979; P:photosynthesis; IMP:CACAO.
DR Gene3D; 1.10.760.10; -; 1.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR002327; Cyt_c_1A/1B.
DR PANTHER; PTHR11961; PTHR11961; 1.
DR Pfam; PF00034; Cytochrom_C; 1.
DR PRINTS; PR00604; CYTCHRMECIAB.
DR SUPFAM; SSF46626; SSF46626; 1.
DR PROSITE; PS51007; CYTC; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cell membrane; Electron transport; Heme; Iron; Membrane;
KW Metal-binding; Photosynthesis; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..199
FT /note="Cytochrome c-type cyt cy"
FT /id="PRO_0000108421"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 69..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 112
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 115
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 116
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 148
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
SQ SEQUENCE 199 AA; 20659 MW; 7606E351A6D9FBC3 CRC64;
MLVKTHITKI GVTLFAVALF YGFIYMLSNS LFATRPATAV AVGADGKALL PSVDEAAMPA
KAPAAAAPAA ETAEAAAPAE PAAPPPPAYV EVDPATITGD AKAGEEKFNK TCKACHKIDG
KNAVGPHLNG VIGRATATVE GFKYSTAMKN HVGNWTPERL DIYLVSPKAE VPGTKMSFVG
LPEAADRANV IAYLNTLPR