CYL2_ORYSJ
ID CYL2_ORYSJ Reviewed; 272 AA.
AC Q67WE2; Q0DAQ4;
DT 25-APR-2018, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Cyclase-like protein 2 {ECO:0000303|PubMed:25974367};
DE Short=OsCYL2 {ECO:0000303|PubMed:25974367};
DE Flags: Precursor;
GN Name=CYL2 {ECO:0000303|PubMed:25974367};
GN OrderedLocusNames=Os06g0638700 {ECO:0000312|EMBL:BAS98785.1},
GN LOC_Os06g43180 {ECO:0000305};
GN ORFNames=P0523F01.29 {ECO:0000312|EMBL:BAD37527.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP TISSUE SPECIFICITY, INDUCTION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=25974367; DOI=10.1016/j.jplph.2015.03.018;
RA Qin Y., Shen X., Wang N., Ding X.;
RT "Characterization of a novel cyclase-like gene family involved in
RT controlling stress tolerance in rice.";
RL J. Plant Physiol. 181:30-41(2015).
CC -!- FUNCTION: May be involved in response to stresses.
CC {ECO:0000250|UniProtKB:Q6YX89}.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000250|UniProtKB:Q6YX89}.
CC -!- TISSUE SPECIFICITY: Highly expressed in leaf sheaths and flag leaves.
CC Expressed in roots, stems, leaf collars, glumes, young panicles and
CC pistils. {ECO:0000269|PubMed:25974367}.
CC -!- INDUCTION: Induced bycold, salt and drought stresses. Induced by
CC abscisic acid, auxine, brassinosteroid, gibberellin, jasmonate,
CC kinetin, reactive oxygen species and salicylate.
CC -!- SIMILARITY: Belongs to the Cyclase 1 superfamily. {ECO:0000305}.
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DR EMBL; AP003573; BAD37527.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF20069.2; -; Genomic_DNA.
DR EMBL; AP014962; BAS98785.1; -; Genomic_DNA.
DR EMBL; AK108500; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015643134.1; XM_015787648.1.
DR RefSeq; XP_015643135.1; XM_015787649.1.
DR RefSeq; XP_015643136.1; XM_015787650.1.
DR RefSeq; XP_015643137.1; XM_015787651.1.
DR RefSeq; XP_015643138.1; XM_015787652.1.
DR RefSeq; XP_015643139.1; XM_015787653.1.
DR RefSeq; XP_015643140.1; XM_015787654.1.
DR RefSeq; XP_015643142.1; XM_015787656.1.
DR AlphaFoldDB; Q67WE2; -.
DR SMR; Q67WE2; -.
DR STRING; 4530.OS06T0638700-01; -.
DR PaxDb; Q67WE2; -.
DR PRIDE; Q67WE2; -.
DR EnsemblPlants; Os06t0638700-01; Os06t0638700-01; Os06g0638700.
DR Gramene; Os06t0638700-01; Os06t0638700-01; Os06g0638700.
DR KEGG; osa:4341616; -.
DR eggNOG; ENOG502QRBQ; Eukaryota.
DR HOGENOM; CLU_030671_4_1_1; -.
DR InParanoid; Q67WE2; -.
DR OMA; MEVQWSS; -.
DR OrthoDB; 1264549at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0004061; F:arylformamidase activity; IBA:GO_Central.
DR GO; GO:0019441; P:tryptophan catabolic process to kynurenine; IBA:GO_Central.
DR Gene3D; 3.50.30.50; -; 1.
DR InterPro; IPR007325; KFase/CYL.
DR InterPro; IPR037175; KFase_sf.
DR PANTHER; PTHR31118; PTHR31118; 1.
DR Pfam; PF04199; Cyclase; 1.
DR SUPFAM; SSF102198; SSF102198; 1.
PE 2: Evidence at transcript level;
KW Extracellular matrix; Reference proteome; Secreted; Signal;
KW Stress response.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..272
FT /note="Cyclase-like protein 2"
FT /id="PRO_5011947508"
SQ SEQUENCE 272 AA; 29194 MW; 17FC02E466BFEC31 CRC64;
MAHLATVVLL LVAAARQAPL AAGDHSANPR LPTCAAAPDV AAPQEHGDGG GVGGGRRILD
ITHAVRAELP VLGSCDGVGA LVRLKKSMAN GSRSNLSELR MSVHTGTHVD APGHMWQPHF
DAGLDVDTLD LGLLNGPALL VDVPRHSNVT AEVMESLNIP RGVRRVLFRT MNTDKRLMWQ
KESDLSFVGF TEDGAQWLVG YTDIKLVGVD YLSVASYEHM IPAHVVFLKS KEIVIVEALK
LDDVEPGMYM LHCLPLRLAG AEGSPVRCIL IK