CYTM1_HUMAN
ID CYTM1_HUMAN Reviewed; 97 AA.
AC Q9H1C7; Q8TBA5;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Cysteine-rich and transmembrane domain-containing protein 1;
GN Name=CYSTM1; Synonyms=C5orf32; ORFNames=ORF1-FL49;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Skeletal muscle;
RA Ievolella C., Zara I., Millino C., Faulkner G., Lanfranchi G.;
RT "Full length sequencing of some human and murine muscular transcripts
RT (Telethon Italy project B41).";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT SER-90.
RC TISSUE=Brain, and Skin;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- INTERACTION:
CC Q9H1C7; O95817: BAG3; NbExp=3; IntAct=EBI-12867082, EBI-747185;
CC Q9H1C7; Q17RD7: SYT16; NbExp=3; IntAct=EBI-12867082, EBI-10238936;
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the CYSTM1 family. {ECO:0000305}.
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DR EMBL; AJ245877; CAC21572.1; -; mRNA.
DR EMBL; BC013643; AAH13643.1; -; mRNA.
DR EMBL; BC023982; AAH23982.1; -; mRNA.
DR CCDS; CCDS4221.1; -.
DR RefSeq; NP_115788.1; NM_032412.3.
DR AlphaFoldDB; Q9H1C7; -.
DR BioGRID; 124070; 23.
DR IntAct; Q9H1C7; 5.
DR STRING; 9606.ENSP00000261811; -.
DR iPTMnet; Q9H1C7; -.
DR PhosphoSitePlus; Q9H1C7; -.
DR SwissPalm; Q9H1C7; -.
DR BioMuta; CYSTM1; -.
DR EPD; Q9H1C7; -.
DR jPOST; Q9H1C7; -.
DR MassIVE; Q9H1C7; -.
DR MaxQB; Q9H1C7; -.
DR PaxDb; Q9H1C7; -.
DR PeptideAtlas; Q9H1C7; -.
DR PRIDE; Q9H1C7; -.
DR ProteomicsDB; 80399; -.
DR Antibodypedia; 26841; 16 antibodies from 10 providers.
DR DNASU; 84418; -.
DR Ensembl; ENST00000261811.6; ENSP00000261811.4; ENSG00000120306.11.
DR GeneID; 84418; -.
DR KEGG; hsa:84418; -.
DR MANE-Select; ENST00000261811.6; ENSP00000261811.4; NM_032412.4; NP_115788.1.
DR UCSC; uc003lfd.4; human.
DR CTD; 84418; -.
DR DisGeNET; 84418; -.
DR GeneCards; CYSTM1; -.
DR HGNC; HGNC:30239; CYSTM1.
DR HPA; ENSG00000120306; Tissue enhanced (stomach).
DR neXtProt; NX_Q9H1C7; -.
DR OpenTargets; ENSG00000120306; -.
DR PharmGKB; PA162380028; -.
DR VEuPathDB; HostDB:ENSG00000120306; -.
DR eggNOG; ENOG502S7AZ; Eukaryota.
DR GeneTree; ENSGT00500000045016; -.
DR HOGENOM; CLU_155323_0_0_1; -.
DR InParanoid; Q9H1C7; -.
DR TreeFam; TF332352; -.
DR PathwayCommons; Q9H1C7; -.
DR Reactome; R-HSA-6798695; Neutrophil degranulation.
DR SignaLink; Q9H1C7; -.
DR BioGRID-ORCS; 84418; 9 hits in 1070 CRISPR screens.
DR ChiTaRS; CYSTM1; human.
DR GenomeRNAi; 84418; -.
DR Pharos; Q9H1C7; Tdark.
DR PRO; PR:Q9H1C7; -.
DR Proteomes; UP000005640; Chromosome 5.
DR RNAct; Q9H1C7; protein.
DR Bgee; ENSG00000120306; Expressed in pylorus and 182 other tissues.
DR ExpressionAtlas; Q9H1C7; baseline and differential.
DR Genevisible; Q9H1C7; HS.
DR GO; GO:0070062; C:extracellular exosome; HDA:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; TAS:Reactome.
DR GO; GO:0070821; C:tertiary granule membrane; TAS:Reactome.
DR InterPro; IPR043240; CYSTM1.
DR InterPro; IPR028144; CYSTM_dom.
DR PANTHER; PTHR47564; PTHR47564; 1.
DR Pfam; PF12734; CYSTM; 1.
PE 1: Evidence at protein level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..97
FT /note="Cysteine-rich and transmembrane domain-containing
FT protein 1"
FT /id="PRO_0000296358"
FT TRANSMEM 74..91
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..43
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VARIANT 90
FT /note="C -> S (in dbSNP:rs17852164)"
FT /evidence="ECO:0000269|PubMed:15489334"
FT /id="VAR_034629"
SQ SEQUENCE 97 AA; 10631 MW; 93A64A2482B41F5B CRC64;
MNQENPPPYP GPGPTAPYPP YPPQPMGPGP MGGPYPPPQG YPYQGYPQYG WQGGPQEPPK
TTVYVVEDQR RDELGPSTCL TACWTALCCC CLWDMLT