D13_FOWPN
ID D13_FOWPN Reviewed; 552 AA.
AC P0DTA5; O72909; Q70HA0; Q9J5F4;
DT 16-OCT-2019, integrated into UniProtKB/Swiss-Prot.
DT 16-OCT-2019, sequence version 1.
DT 12-AUG-2020, entry version 5.
DE RecName: Full=Scaffold protein;
DE AltName: Full=62 kDa protein;
DE AltName: Full=D13 ortholog;
DE AltName: Full=N3L protein;
DE AltName: Full=Rifampicin resistance protein;
GN OrderedLocusNames=FPV050, fp9.050; ORFNames=FP-D13, FPD13;
OS Fowlpox virus (strain NVSL) (FPV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus.
OX NCBI_TaxID=928301;
OH NCBI_TaxID=7742; Vertebrata.
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10729156; DOI=10.1128/jvi.74.8.3815-3831.2000;
RA Afonso C.L., Tulman E.R., Lu Z., Zsak L., Kutish G.F., Rock D.L.;
RT "The genome of fowlpox virus.";
RL J. Virol. 74:3815-3831(2000).
CC -!- FUNCTION: Scaffold protein which forms a transitory spherical honeycomb
CC lattice providing curvature and rigidity to the convex membrane of
CC crescent and immature virions (IV). This association occurs
CC concomitantly with viral membrane formation. Targeted by the drug
CC rifampicin, which prevents the formation of this lattice, and hence
CC virus morphogenesis. In the presence of rifampicin, irregularly shaped
CC membranes that lack the honeycomb layer accumulate around areas of
CC electron-dense viroplasm. This layer is lost from virions during
CC maturation from IV to mature virion (MV), through the proteolysis of
CC A17 N-terminus (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homotrimer (By similarity). Self-assembles to form a layer.
CC Interacts with A17 (via N-terminus); this interaction is necessary for
CC D13 association with membranes (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane; Peripheral membrane protein.
CC Note=Associates transitorily with crescent and IV membranes.
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Displays structure similarities to capsid proteins.
CC -!- SIMILARITY: Belongs to the poxviridae protein D13 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF44394.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF198100; AAF44394.1; ALT_SEQ; Genomic_DNA.
DR PIR; S42253; S42253.
DR SMR; P0DTA5; -.
DR Proteomes; UP000008597; Genome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046677; P:response to antibiotic; IEA:InterPro.
DR InterPro; IPR005008; Poxvirus_Rif-R.
DR Pfam; PF03340; Pox_Rif; 1.
PE 3: Inferred from homology;
KW Membrane; Reference proteome.
FT CHAIN 1..552
FT /note="Scaffold protein"
FT /id="PRO_0000099129"
SQ SEQUENCE 552 AA; 62413 MW; 899E55999D02A245 CRC64;
MNNSIISSVI NSIDSSSKRT NIFSFDVQQP TAYMPQYISV NGYHNKKDND ANQVCSVSFD
IRDQHIAAIN YFFISIQLPE VSGEGKFAYV PYVGYKCIQH VAITCGDITI WETDGEELFD
KCVDDKIASL SGYSPELNDI STGYTPNDTI KDPTTLYVYI KSPFDADKTI SSLKLVNNKI
TVTITFRSIN DVIVYDSKFQ VERFVKDFVY STELHLIAYA VSDIKPKSAY IELDRRVVSC
SSTPTPIPVI SDVYACTAMS VYVKPYYGMM ENKFISYPGY KQTESDYVRC MVNRLLDDLV
VVADTVPKGF PSTATFVKVP VDGQINLQDV DIIVKIDNVP DDKDIYYHTN LLIFGTRKNS
FVYNISKKFS SIIGMYSPNT DSINFSKVNH TISITDASIP VSFWVSQKNV YQGDNRSNYS
KSKDLVVNDP FRKGIDMVNK TDVISRLEVR FGNDPIYSEI SPITKVFNML LTGSSINMRK
IIFNMNPANI FRPTTLNANT KRGKDKLTVR ISYIDTDPNN PIHYVAKQLV VICTDLYRID
YDGNINITKI TE