D14L_ORYSJ
ID D14L_ORYSJ Reviewed; 271 AA.
AC Q10J20; A0A0P0Y1L3;
DT 03-APR-2013, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Probable esterase D14L;
DE AltName: Full=Protein DWARF-14-like;
DE Short=Protein D14-like;
DE AltName: Full=Protein HEBIBA D14L {ECO:0000303|PubMed:26680197};
GN Name=D14L;
GN OrderedLocusNames=Os03g0437600 {ECO:0000312|EMBL:BAS84851.1},
GN LOC_Os03g32270 {ECO:0000305};
GN and
GN OrderedLocusNames=Os11g0384789 {ECO:0000312|EMBL:BAT13755.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (OS03G0437600).
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (OS03G0437600 AND
RP OS11G0384789).
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (OS03G0437600 AND OS11G0384789).
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP FUNCTION, DISRUPTION PHENOTYPE, SUBCELLULAR LOCATION, TISSUE SPECIFICITY,
RP AND SUBUNIT.
RC STRAIN=cv. Nihonmasari, and cv. Nipponbare;
RX PubMed=26680197; DOI=10.1126/science.aac9715;
RA Gutjahr C., Gobbato E., Choi J., Riemann M., Johnston M.G., Summers W.,
RA Carbonnel S., Mansfield C., Yang S.Y., Nadal M., Acosta I., Takano M.,
RA Jiao W.B., Schneeberger K., Kelly K.A., Paszkowski U.;
RT "Rice perception of symbiotic arbuscular mycorrhizal fungi requires the
RT karrikin receptor complex.";
RL Science 350:1521-1524(2015).
CC -!- FUNCTION: May be involved in strigolactone signaling pathway (By
CC similarity). Essential for plant responses to karrikins, a class of
CC butenolide compounds, structurally similar to strigolactones, released
CC from burning vegetation that stimulate seed germination and enhance
CC seedling photomorphogenesis. Mediates a specific perception of
CC karrikin. Required for the establishment of symbiosis with the
CC arbuscular mycorrhizal fungi (AMF) Rhizophagus irregularis and
CC Gigaspora rosea (PubMed:26680197). Karrikin binding induces a
CC conformational change (By similarity). {ECO:0000250|UniProtKB:Q10QA5,
CC ECO:0000250|UniProtKB:Q9SZU7, ECO:0000269|PubMed:26680197}.
CC -!- SUBUNIT: Component of an intracellular receptor complex involved in the
CC detection of the smoke compound karrikin.
CC {ECO:0000305|PubMed:26680197}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:26680197}. Cytoplasm
CC {ECO:0000269|PubMed:26680197}.
CC -!- TISSUE SPECIFICITY: Expressed constitutively in all organs (e.g. roots,
CC stems, leaves, panicles and embryos). {ECO:0000269|PubMed:26680197}.
CC -!- DISRUPTION PHENOTYPE: Loss of responsiveness to and symbiosis with the
CC arbuscular mycorrhizal fungi (AMF) Rhizophagus irregularis and
CC Gigaspora rosea characterized by the absence of physical contact and of
CC characteristic transcriptional responses to fungal signals.
CC {ECO:0000269|PubMed:26680197}.
CC -!- SIMILARITY: Belongs to the AB hydrolase superfamily. {ECO:0000305}.
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DR EMBL; DP000009; ABF96818.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF12359.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS84851.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT13755.1; -; Genomic_DNA.
DR EMBL; AK061303; BAG87846.1; -; mRNA.
DR EMBL; AK104138; BAG96447.1; -; mRNA.
DR EMBL; AK104400; BAG96649.1; -; mRNA.
DR RefSeq; XP_015617518.1; XM_015762032.1.
DR RefSeq; XP_015631879.1; XM_015776393.1.
DR AlphaFoldDB; Q10J20; -.
DR SMR; Q10J20; -.
DR STRING; 4530.OS03T0437600-01; -.
DR ESTHER; orysj-q10j20; RsbQ-like.
DR PaxDb; Q10J20; -.
DR PRIDE; Q10J20; -.
DR EnsemblPlants; Os03t0437600-01; Os03t0437600-01; Os03g0437600.
DR EnsemblPlants; Os03t0437600-02; Os03t0437600-02; Os03g0437600.
DR EnsemblPlants; Os11t0384789-01; Os11t0384789-01; Os11g0384789.
DR EnsemblPlants; Os11t0384789-02; Os11t0384789-02; Os11g0384789.
DR GeneID; 107275935; -.
DR GeneID; 4333199; -.
DR Gramene; Os03t0437600-01; Os03t0437600-01; Os03g0437600.
DR Gramene; Os03t0437600-02; Os03t0437600-02; Os03g0437600.
DR Gramene; Os11t0384789-01; Os11t0384789-01; Os11g0384789.
DR Gramene; Os11t0384789-02; Os11t0384789-02; Os11g0384789.
DR KEGG; osa:107275935; -.
DR KEGG; osa:4333199; -.
DR eggNOG; ENOG502QQIJ; Eukaryota.
DR HOGENOM; CLU_020336_30_0_1; -.
DR InParanoid; Q10J20; -.
DR OMA; VCPSPCF; -.
DR OrthoDB; 1061420at2759; -.
DR PlantReactome; R-OSA-5654828; Strigolactone signaling.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q10J20; baseline and differential.
DR Genevisible; Q10J20; OS.
DR GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0036377; P:arbuscular mycorrhizal association; IMP:UniProtKB.
DR GO; GO:0080167; P:response to karrikin; IDA:UniProtKB.
DR Gene3D; 3.40.50.1820; -; 1.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR000073; AB_hydrolase_1.
DR Pfam; PF12697; Abhydrolase_6; 1.
DR SUPFAM; SSF53474; SSF53474; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Hydrolase; Nucleus; Reference proteome.
FT CHAIN 1..271
FT /note="Probable esterase D14L"
FT /id="PRO_0000422057"
FT ACT_SITE 96
FT /note="Nucleophile"
FT /evidence="ECO:0000250|UniProtKB:Q10QA5"
FT ACT_SITE 218
FT /evidence="ECO:0000250|UniProtKB:Q10QA5"
FT ACT_SITE 247
FT /evidence="ECO:0000250|UniProtKB:Q10QA5"
SQ SEQUENCE 271 AA; 29632 MW; 5277E013AF7076EC CRC64;
MGIVEEAHNL RVVGEGKRGV IVLAHGFGTD QSVWKHLVPH LVADYRVVLF DTMGAGPTNP
DYFDFSRYAT LEGYALDLLA ILQELRVASC IYVGHSVSAV IGAIASISRP DLFSKLVLLS
ASPRYLNDVD YYGGFEQEDL DELFEAMGSN YKAWCSGFAP LCVGGDMESV AVQEFSRTLF
NIRPDIALSV AQTIFQSDVR SLLPLVTVPC HIVQSTKDLA VPVVVSEYLH KHLGGDSIVE
VMPSEGHLPQ LSSPDIVIPV LLRHIQHDIA V
