ID   DAAA_STAEQ              Reviewed;         282 AA.
AC   Q5HNG0;
DT   27-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT   15-FEB-2005, sequence version 1.
DT   03-AUG-2022, entry version 89.
DE   RecName: Full=D-alanine aminotransferase;
DE            EC=2.6.1.21;
DE   AltName: Full=D-amino acid aminotransferase;
DE   AltName: Full=D-amino acid transaminase;
DE            Short=DAAT;
DE   AltName: Full=D-aspartate aminotransferase;
GN   Name=dat; OrderedLocusNames=SERP1309;
OS   Staphylococcus epidermidis (strain ATCC 35984 / RP62A).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=176279;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35984 / RP62A;
RX   PubMed=15774886; DOI=10.1128/jb.187.7.2426-2438.2005;
RA   Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J.,
RA   Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J., Dodson R.J.,
RA   Daugherty S.C., Madupu R., Angiuoli S.V., Durkin A.S., Haft D.H.,
RA   Vamathevan J.J., Khouri H., Utterback T.R., Lee C., Dimitrov G., Jiang L.,
RA   Qin H., Weidman J., Tran K., Kang K.H., Hance I.R., Nelson K.E.,
RA   Fraser C.M.;
RT   "Insights on evolution of virulence and resistance from the complete genome
RT   analysis of an early methicillin-resistant Staphylococcus aureus strain and
RT   a biofilm-producing methicillin-resistant Staphylococcus epidermidis
RT   strain.";
RL   J. Bacteriol. 187:2426-2438(2005).
CC   -!- FUNCTION: Acts on the D-isomers of alanine, leucine, aspartate,
CC       glutamate, aminobutyrate, norvaline and asparagine. The enzyme
CC       transfers an amino group from a substrate D-amino acid to the pyridoxal
CC       phosphate cofactor to form pyridoxamine and an alpha-keto acid in the
CC       first half-reaction. The second half-reaction is the reverse of the
CC       first, transferring the amino group from the pyridoxamine to a second
CC       alpha-keto acid to form the product D-amino acid via a ping-pong
CC       mechanism. This is an important process in the formation of D-alanine
CC       and D-glutamate, which are essential bacterial cell wall components (By
CC       similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=2-oxoglutarate + D-alanine = D-glutamate + pyruvate;
CC         Xref=Rhea:RHEA:15869, ChEBI:CHEBI:15361, ChEBI:CHEBI:16810,
CC         ChEBI:CHEBI:29986, ChEBI:CHEBI:57416; EC=2.6.1.21;
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000250};
CC   -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the class-IV pyridoxal-phosphate-dependent
CC       aminotransferase family. {ECO:0000305}.
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DR   EMBL; CP000029; AAW54637.1; -; Genomic_DNA.
DR   RefSeq; WP_002484981.1; NC_002976.3.
DR   AlphaFoldDB; Q5HNG0; -.
DR   SMR; Q5HNG0; -.
DR   STRING; 176279.SERP1309; -.
DR   EnsemblBacteria; AAW54637; AAW54637; SERP1309.
DR   KEGG; ser:SERP1309; -.
DR   eggNOG; COG0115; Bacteria.
DR   HOGENOM; CLU_020844_4_1_9; -.
DR   OMA; SMGKMMA; -.
DR   OrthoDB; 885013at2; -.
DR   Proteomes; UP000000531; Chromosome.
DR   GO; GO:0047810; F:D-alanine:2-oxoglutarate aminotransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR   GO; GO:0046416; P:D-amino acid metabolic process; IEA:InterPro.
DR   Gene3D; 3.20.10.10; -; 1.
DR   Gene3D; 3.30.470.10; -; 1.
DR   InterPro; IPR001544; Aminotrans_IV.
DR   InterPro; IPR018300; Aminotrans_IV_CS.
DR   InterPro; IPR036038; Aminotransferase-like.
DR   InterPro; IPR043132; BCAT-like_C.
DR   InterPro; IPR043131; BCAT-like_N.
DR   InterPro; IPR005784; D_amino_transT.
DR   Pfam; PF01063; Aminotran_4; 1.
DR   SUPFAM; SSF56752; SSF56752; 1.
DR   TIGRFAMs; TIGR01121; D_amino_aminoT; 1.
DR   PROSITE; PS00770; AA_TRANSFER_CLASS_4; 1.
PE   3: Inferred from homology;
KW   Aminotransferase; Pyridoxal phosphate; Reference proteome; Transferase.
FT   CHAIN           1..282
FT                   /note="D-alanine aminotransferase"
FT                   /id="PRO_0000103260"
FT   ACT_SITE        146
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   BINDING         32
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   BINDING         51
FT                   /ligand="pyridoxal 5'-phosphate"
FT                   /ligand_id="ChEBI:CHEBI:597326"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   BINDING         99
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   BINDING         101
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   BINDING         178
FT                   /ligand="pyridoxal 5'-phosphate"
FT                   /ligand_id="ChEBI:CHEBI:597326"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
FT   MOD_RES         146
FT                   /note="N6-(pyridoxal phosphate)lysine"
FT                   /evidence="ECO:0000250|UniProtKB:P19938"
SQ   SEQUENCE   282 AA;  32163 MW;  8BAB922A757B9F2C CRC64;
     MTKVFINGEF VNEEDAKVSY EDRGYVFGDG IYEYIRAYDG KLFTVKEHFE RFLRSAEEIG
     LDLNYTIEEL IELVRRLLKE NNVVNGGIYI QATRGAAPRN HSFPTPPVKP VIMAFTKSYD
     RPYEELEQGV YAITTEDIRW LRCDIKSLNL LGNVLAKEYA VKYNAAEAIQ HRGDIVTEGA
     SSNVYAIKDG VIYTHPVNNF ILNGITRRVI KWIAEDEQIP FKEEKFTVEF LKSADEVIIS
     STSAEVMPIT KIDGENVQDG QVGTITRQLQ QGFEKYIQSH SI