DABB1_ARATH
ID DABB1_ARATH Reviewed; 210 AA.
AC Q9SYD8;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Stress-response A/B barrel domain-containing protein DABB1 {ECO:0000305};
DE AltName: Full=Dimeric A/B barrel domain-containing protein 1 {ECO:0000303|PubMed:18674644};
DE Short=AtDabb1 {ECO:0000303|PubMed:18674644};
GN Name=DABB1 {ECO:0000303|PubMed:18674644};
GN OrderedLocusNames=At1g51360 {ECO:0000312|Araport:AT1G51360};
GN ORFNames=F11M15.22 {ECO:0000312|EMBL:AAD30647.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY, FUNCTION, SUBCELLULAR LOCATION, AND
RP INDUCTION.
RX PubMed=18674644; DOI=10.1016/j.bbapap.2008.06.023;
RA Lee J.R., Lee S.S., Park S.C., Kang J.S., Kim S.Y., Lee K.O., Lee S.Y.;
RT "Functional characterization of pathogen-responsive protein AtDabb1 with an
RT antifungal activity from Arabidopsis thaliana.";
RL Biochim. Biophys. Acta 1784:1918-1923(2008).
CC -!- FUNCTION: Involved in defense against fungal pathogens. Possesses
CC antifungal activity against diverse pathogenic fungi.
CC {ECO:0000269|PubMed:18674644}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:Q9LUV2}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000269|PubMed:18674644}.
CC -!- INDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA) and
CC infection with the fungal pathogen F.oxysporum.
CC {ECO:0000269|PubMed:18674644}.
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DR EMBL; AC006085; AAD30647.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32656.1; -; Genomic_DNA.
DR EMBL; BT010487; AAQ65110.1; -; mRNA.
DR EMBL; AK175329; BAD43092.1; -; mRNA.
DR EMBL; AK176865; BAD44628.1; -; mRNA.
DR PIR; F96551; F96551.
DR RefSeq; NP_175547.1; NM_104014.4.
DR AlphaFoldDB; Q9SYD8; -.
DR SMR; Q9SYD8; -.
DR STRING; 3702.AT1G51360.1; -.
DR PaxDb; Q9SYD8; -.
DR PRIDE; Q9SYD8; -.
DR ProteomicsDB; 222601; -.
DR DNASU; 841560; -.
DR EnsemblPlants; AT1G51360.1; AT1G51360.1; AT1G51360.
DR GeneID; 841560; -.
DR Gramene; AT1G51360.1; AT1G51360.1; AT1G51360.
DR KEGG; ath:AT1G51360; -.
DR Araport; AT1G51360; -.
DR TAIR; locus:2008261; AT1G51360.
DR eggNOG; ENOG502QTKV; Eukaryota.
DR HOGENOM; CLU_087754_0_0_1; -.
DR InParanoid; Q9SYD8; -.
DR OMA; TASDFTH; -.
DR OrthoDB; 1217016at2759; -.
DR PhylomeDB; Q9SYD8; -.
DR PRO; PR:Q9SYD8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SYD8; baseline and differential.
DR GO; GO:0005829; C:cytosol; IDA:TAIR.
DR GO; GO:0050832; P:defense response to fungus; IDA:TAIR.
DR GO; GO:0009620; P:response to fungus; IEP:TAIR.
DR GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
DR InterPro; IPR013097; Dabb.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR044662; HS1/DABB1-like.
DR PANTHER; PTHR33178; PTHR33178; 1.
DR Pfam; PF07876; Dabb; 2.
DR SMART; SM00886; Dabb; 2.
DR SUPFAM; SSF54909; SSF54909; 2.
DR PROSITE; PS51502; S_R_A_B_BARREL; 2.
PE 1: Evidence at protein level;
KW Cytoplasm; Plant defense; Reference proteome.
FT CHAIN 1..210
FT /note="Stress-response A/B barrel domain-containing protein
FT DABB1"
FT /id="PRO_0000436069"
FT DOMAIN 5..100
FT /note="Stress-response A/B barrel 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00835"
FT DOMAIN 116..204
FT /note="Stress-response A/B barrel 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00835"
SQ SEQUENCE 210 AA; 23652 MW; 72CC4F22C18DC4E2 CRC64;
MSSIVEHVVL FKLNDDDVDS GKINSMVNGI NELVNLDQVL HLYCGSIHRL ITTTASDFTH
VLHSRYRSKE DLNAYAIHPD HVRVVKESES IREDIMAVDW IAEQAPEALA PPLGSIGKIT
LLKLKENVME EAKLEIMEVM KEKFEGIDQI TVGENFSPGR SKDFSIGSIS YFRDLGEIEA
VDDQMKLQND KIRDYVDDTI VVEFNVPSSS
