DADA_SINMW
ID DADA_SINMW Reviewed; 416 AA.
AC A6UB96;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=D-amino acid dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01202};
DE EC=1.4.99.- {ECO:0000255|HAMAP-Rule:MF_01202};
GN Name=dadA {ECO:0000255|HAMAP-Rule:MF_01202}; OrderedLocusNames=Smed_2093;
OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=366394;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM419;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G.,
RA Richardson P.;
RT "Complete sequence of Sinorhizobium medicae WSM419 chromosome.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Oxidative deamination of D-amino acids. {ECO:0000255|HAMAP-
CC Rule:MF_01202}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=A + a D-alpha-amino acid + H2O = a 2-oxocarboxylate + AH2 +
CC NH4(+); Xref=Rhea:RHEA:18125, ChEBI:CHEBI:13193, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:17499, ChEBI:CHEBI:28938, ChEBI:CHEBI:35179,
CC ChEBI:CHEBI:59871; Evidence={ECO:0000255|HAMAP-Rule:MF_01202};
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01202};
CC -!- PATHWAY: Amino-acid degradation; D-alanine degradation; NH(3) and
CC pyruvate from D-alanine: step 1/1.
CC -!- SIMILARITY: Belongs to the DadA oxidoreductase family.
CC {ECO:0000255|HAMAP-Rule:MF_01202}.
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DR EMBL; CP000738; ABR60926.1; -; Genomic_DNA.
DR RefSeq; WP_011976223.1; NC_009636.1.
DR RefSeq; YP_001327761.1; NC_009636.1.
DR AlphaFoldDB; A6UB96; -.
DR SMR; A6UB96; -.
DR STRING; 366394.Smed_2093; -.
DR EnsemblBacteria; ABR60926; ABR60926; Smed_2093.
DR GeneID; 61613003; -.
DR KEGG; smd:Smed_2093; -.
DR PATRIC; fig|366394.8.peg.5251; -.
DR eggNOG; COG0665; Bacteria.
DR HOGENOM; CLU_007884_9_2_5; -.
DR OMA; NDLYPRG; -.
DR OrthoDB; 573710at2; -.
DR UniPathway; UPA00043; UER00498.
DR Proteomes; UP000001108; Chromosome.
DR GO; GO:0008718; F:D-amino-acid dehydrogenase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0055130; P:D-alanine catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_01202; DadA; 1.
DR InterPro; IPR023080; DadA.
DR InterPro; IPR006076; FAD-dep_OxRdtase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR Pfam; PF01266; DAO; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
PE 3: Inferred from homology;
KW FAD; Flavoprotein; Oxidoreductase.
FT CHAIN 1..416
FT /note="D-amino acid dehydrogenase"
FT /id="PRO_1000066120"
FT BINDING 3..17
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01202"
SQ SEQUENCE 416 AA; 44828 MW; 77DDA7D0EB49BFD5 CRC64;
MKVIVLGAGI IGVTSAYQLS RAGHEVTVID RQPGPALETS FANAGEVSFG YCSPWAAPGI
PMKALKWLFM QHAPLILRPR IDAAMLSWMA KMLSNCTSRR YAVNKSRMLR LADYSRTSLA
ALREETAITY DERMQGTLQL FRTEAQLDAS AKDISALAAD GIPYEVLDRD GCIRAEPALG
RVRDKIVGGL LTPQDETGDC FKFANALAGR AEKLGVCFDY GTEIRALEVD GGRVHGVVTS
KGRRAADAVV VALGSYSPLL VRRFGIRLPV YPVKGYSLTI PIADASRAPV STVMDETYKI
AITRLGDRIR VGGMAEISGY TNDLGIARRR TLEHSVMDLF PGGDAAKGSF WSGLRPMTPD
GTPVIGPTRI AGLFLNTGHG TLGWTMSSGS ARVIADLVSD RKLEIDATDL AIARYG