DADA_VIBCM
ID DADA_VIBCM Reviewed; 421 AA.
AC C3LT39;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-JUN-2009, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=D-amino acid dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01202};
DE EC=1.4.99.- {ECO:0000255|HAMAP-Rule:MF_01202};
GN Name=dadA {ECO:0000255|HAMAP-Rule:MF_01202}; OrderedLocusNames=VCM66_0744;
OS Vibrio cholerae serotype O1 (strain M66-2).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=579112;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M66-2;
RX PubMed=19115014; DOI=10.1371/journal.pone.0004053;
RA Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J.,
RA Wang W., Wang J., Qian W., Li D., Wang L.;
RT "A recalibrated molecular clock and independent origins for the cholera
RT pandemic clones.";
RL PLoS ONE 3:E4053-E4053(2008).
CC -!- FUNCTION: Oxidative deamination of D-amino acids. {ECO:0000255|HAMAP-
CC Rule:MF_01202}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=A + a D-alpha-amino acid + H2O = a 2-oxocarboxylate + AH2 +
CC NH4(+); Xref=Rhea:RHEA:18125, ChEBI:CHEBI:13193, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:17499, ChEBI:CHEBI:28938, ChEBI:CHEBI:35179,
CC ChEBI:CHEBI:59871; Evidence={ECO:0000255|HAMAP-Rule:MF_01202};
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01202};
CC -!- PATHWAY: Amino-acid degradation; D-alanine degradation; NH(3) and
CC pyruvate from D-alanine: step 1/1.
CC -!- SIMILARITY: Belongs to the DadA oxidoreductase family.
CC {ECO:0000255|HAMAP-Rule:MF_01202}.
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DR EMBL; CP001233; ACP05065.1; -; Genomic_DNA.
DR RefSeq; WP_001894375.1; NC_012578.1.
DR AlphaFoldDB; C3LT39; -.
DR SMR; C3LT39; -.
DR EnsemblBacteria; ACP05065; ACP05065; VCM66_0744.
DR KEGG; vcm:VCM66_0744; -.
DR HOGENOM; CLU_007884_9_2_6; -.
DR OMA; FWYKEDG; -.
DR UniPathway; UPA00043; UER00498.
DR Proteomes; UP000001217; Chromosome I.
DR GO; GO:0008718; F:D-amino-acid dehydrogenase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0055130; P:D-alanine catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_01202; DadA; 1.
DR InterPro; IPR023080; DadA.
DR InterPro; IPR006076; FAD-dep_OxRdtase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR Pfam; PF01266; DAO; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
PE 3: Inferred from homology;
KW FAD; Flavoprotein; Oxidoreductase.
FT CHAIN 1..421
FT /note="D-amino acid dehydrogenase"
FT /id="PRO_1000164644"
FT BINDING 4..18
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01202"
SQ SEQUENCE 421 AA; 46267 MW; C7233E7FC87FBBB4 CRC64;
MMEVLVLGSG VVGLTSAWYL AQAGHDVTVV DRQPRGAEET SFANAGQISY GYSSPWAAPG
IPQKALKWML EKHAPLKIQP SLDPALLSWM GKMLLNCQLS RYQVNKSRML AIANYSRECL
KALNQTYSLD YQGRQRGTLQ VFRDEKQLTA IEKDMQLLAQ SGVRFELLNV AQCLTHEPGL
APVQEKLVGG LWLPDDETGD CYLFCQQLTE LAKQQGVRFH FDCHIQQLVC EGKKIIGVQT
DLGLLKADAY VVALGSYSTS LLKPLGIEIP VYPVKGYSLT LPIIDEKFAP QSTVMDETYK
VALTRFSDRI RVAGTAELAG FDPAIPEARK ATIEMVARDL FPHGGDFAKG QFWTGFRPMT
PDGTPIIGAT PYTNLYTNTG HGTLGWTMAC GSASILADVL THGESPLSRL GLDLFRYPKA
S