DBP10_ASPCL
ID DBP10_ASPCL Reviewed; 935 AA.
AC A1CTZ6;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=ATP-dependent RNA helicase dbp10;
DE EC=3.6.4.13;
GN Name=dbp10; ORFNames=ACLA_084780;
OS Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
OS NRRL 1 / QM 1276 / 107).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=344612;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: ATP-binding RNA helicase involved in the biogenesis of 60S
CC ribosomal subunits and is required for the normal formation of 25S and
CC 5.8S rRNAs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC subfamily. {ECO:0000305}.
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DR EMBL; DS027060; EAW06783.1; -; Genomic_DNA.
DR RefSeq; XP_001268209.1; XM_001268208.1.
DR AlphaFoldDB; A1CTZ6; -.
DR SMR; A1CTZ6; -.
DR STRING; 5057.CADACLAP00007338; -.
DR PRIDE; A1CTZ6; -.
DR EnsemblFungi; EAW06783; EAW06783; ACLA_084780.
DR GeneID; 4700481; -.
DR KEGG; act:ACLA_084780; -.
DR VEuPathDB; FungiDB:ACLA_084780; -.
DR eggNOG; KOG0337; Eukaryota.
DR HOGENOM; CLU_003041_5_1_1; -.
DR OMA; MRWDKKS; -.
DR OrthoDB; 268859at2759; -.
DR Proteomes; UP000006701; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR012541; DBP10_C.
DR InterPro; IPR033517; DDX54/DBP10.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR24031:SF292; PTHR24031:SF292; 1.
DR Pfam; PF08147; DBP10CT; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01123; DBP10CT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing.
FT CHAIN 1..935
FT /note="ATP-dependent RNA helicase dbp10"
FT /id="PRO_0000281713"
FT DOMAIN 120..292
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 360..514
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 638..674
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 857..935
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 89..117
FT /note="Q motif"
FT MOTIF 240..243
FT /note="DEAD box"
FT COMPBIAS 29..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 859..894
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 921..935
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 133..140
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 935 AA; 103007 MW; B17650287889C359 CRC64;
MAPRAASPAL SENEFDITGA LFQNDSESDN ERSSAKSKRQ PKKKIPSQDL DFLGDVNDDD
GDEAFIAQQQ TSANRKASNL KGRTVKKGGG FQAMGLSANL LKAIARKGFS VPTPIQRKTI
PVIMDDQDVV GMARTGSGKT AAFVIPMIEK LRSHSTKVGA RGLILSPSRE LALQTLKVVK
ELGKGTDLKC VLLVGGDSLE EQFTMMAGNP DIVIATPGRF LHLKVEMNLD LYSIRYVVFD
EADRLFEMGF AAQLTEILHG LPPNRQTLLF SATLPKSLVE FARAGLQEPT LIRLDTESKI
SPDLQNAFFS IKSSEKEGAL LYILHEVIKM PTGPTEMAQQ RQGEDASARF SKANKRKRAE
MEKAVNTKES PTQHSTIVFA ATKHHVDYLY SLLHEAGFAV SYVYGALDQT ARKIQVQNFR
SGLSNILVVT DVAARGIDIP ILANVINYDF PSQPKIFIHR VGRTARAGRK GWSYSLVRDA
DAPYLLDLQL FLGRRLVVGR ENGDHVNFAE DVVAGGLPRD GLSQNCEWVT KVLGDDADIA
AQRTVATKGE KLYMRTRNSA SLESAKRAKQ VVSSDHWTSI HPLFQDESSN LEAEREKMLA
RIGGYRPSET IFEVNTRRIG KQESEEALNT IKRVRTTLET KKKRSKANAK SEFLEDAPEG
LKTGEGEAGK NEDEAAFSDA DDIDAPTGVA DDMSLASDSE LEVTFSSYSQ SNGNKSKKAS
AASFQNPDYF MSYTPNNNSL AEDRAYGVHS GTNSNFAQAS RSATMDLAGD EGSRGFGEPR
TMMRWDKRHK KYVARQNDED GSKGTRLVRG ESGAKIASSF RSGRFDAWKR GNRVGRMPRV
GEAEAPNLAA GLNAALSGKR FKHRREQAPK RADPLRGDYE KMKKKADKAK ERSMSKAGGA
AAGGKSELRN TDDIRIARKL KQRRQEKNAR PSRKR