DBP10_ASPFU
ID DBP10_ASPFU Reviewed; 869 AA.
AC Q8NJM2; Q4WM56;
DT 04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=ATP-dependent RNA helicase dbp10;
DE EC=3.6.4.13;
GN Name=dbp10; ORFNames=AfA12H2.09c, AFUA_6G11120;
OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC
OS A1100) (Aspergillus fumigatus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=330879;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100;
RA Harris D.E., O'Neil S., Knowles D.G., Hall N., Quail M.A., Woodward J.R.,
RA Denning D.W., Anderson M.J., Barrell B.G.;
RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100;
RX PubMed=16372009; DOI=10.1038/nature04332;
RA Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J.,
RA Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J.W., Bowyer P.,
RA Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., Farman M.L.,
RA Fedorova N., Fedorova N.D., Feldblyum T.V., Fischer R., Fosker N.,
RA Fraser A., Garcia J.L., Garcia M.J., Goble A., Goldman G.H., Gomi K.,
RA Griffith-Jones S., Gwilliam R., Haas B.J., Haas H., Harris D.E.,
RA Horiuchi H., Huang J., Humphray S., Jimenez J., Keller N., Khouri H.,
RA Kitamoto K., Kobayashi T., Konzack S., Kulkarni R., Kumagai T., Lafton A.,
RA Latge J.-P., Li W., Lord A., Lu C., Majoros W.H., May G.S., Miller B.L.,
RA Mohamoud Y., Molina M., Monod M., Mouyna I., Mulligan S., Murphy L.D.,
RA O'Neil S., Paulsen I., Penalva M.A., Pertea M., Price C., Pritchard B.L.,
RA Quail M.A., Rabbinowitsch E., Rawlins N., Rajandream M.A., Reichard U.,
RA Renauld H., Robson G.D., Rodriguez de Cordoba S., Rodriguez-Pena J.M.,
RA Ronning C.M., Rutter S., Salzberg S.L., Sanchez M., Sanchez-Ferrero J.C.,
RA Saunders D., Seeger K., Squares R., Squares S., Takeuchi M., Tekaia F.,
RA Turner G., Vazquez de Aldana C.R., Weidman J., White O., Woodward J.R.,
RA Yu J.-H., Fraser C.M., Galagan J.E., Asai K., Machida M., Hall N.,
RA Barrell B.G., Denning D.W.;
RT "Genomic sequence of the pathogenic and allergenic filamentous fungus
RT Aspergillus fumigatus.";
RL Nature 438:1151-1156(2005).
CC -!- FUNCTION: ATP-binding RNA helicase involved in the biogenesis of 60S
CC ribosomal subunits and is required for the normal formation of 25S and
CC 5.8S rRNAs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC subfamily. {ECO:0000305}.
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DR EMBL; AL807577; CAD37147.1; -; Genomic_DNA.
DR EMBL; AAHF01000006; EAL88958.1; -; Genomic_DNA.
DR RefSeq; XP_750996.1; XM_745903.1.
DR AlphaFoldDB; Q8NJM2; -.
DR SMR; Q8NJM2; -.
DR STRING; 746128.CADAFUBP00007518; -.
DR EnsemblFungi; EAL88958; EAL88958; AFUA_6G11120.
DR GeneID; 3508301; -.
DR KEGG; afm:AFUA_6G11120; -.
DR eggNOG; KOG0337; Eukaryota.
DR HOGENOM; CLU_003041_5_1_1; -.
DR InParanoid; Q8NJM2; -.
DR OMA; MRWDKKS; -.
DR OrthoDB; 268859at2759; -.
DR Proteomes; UP000002530; Chromosome 6.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR012541; DBP10_C.
DR InterPro; IPR033517; DDX54/DBP10.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR24031:SF292; PTHR24031:SF292; 1.
DR Pfam; PF08147; DBP10CT; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01123; DBP10CT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing.
FT CHAIN 1..869
FT /note="ATP-dependent RNA helicase dbp10"
FT /id="PRO_0000232309"
FT DOMAIN 101..273
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 341..495
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..869
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 70..98
FT /note="Q motif"
FT MOTIF 221..224
FT /note="DEAD box"
FT COMPBIAS 319..348
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..826
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 854..869
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 114..121
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 869 AA; 96324 MW; 7D8BCD712316391F CRC64;
MPHRAASPAV SENEFDITGA LFQNDSDSDN EQPSAKSKRQ PPKKAFIAEQ QTSANRKASN
LKGRTVKKGG GFQAMGLSAN LLKAIARKGF SVPTPIQRKT IPVIMDDQDV VGMARTGSGK
TAAFVIPMIE KLKSHSTKVG ARGLVLSPSR ELALQTLKVV KELGRGTDLK SVLLVGGDSL
EEQFAMIAGN PDIIIATPGR FLHLKVEMNL DLSSIRYVVF DEADRLFEMG FAAQLTEILH
GLPANRQTLL FSATLPKSLV EFARAGLQEP TLVRLDTESK ISPDLQNAFF SVKSSEKEGA
LLYILHEVIK MPTGPTEVSQ QRKEEDASAK NLKNKKRKRA EMEKAVNTRE SPTKHSTIVF
AATKHHVDYL YSLLCEAGFA VSYVYGSLDQ TARKIQVQNF RTGMTNILVV TDVAARGIDI
PILANVINYD FPSQPKIFVH RVGRTARAGR KGWSYSLVRD ADAPYLLDLQ LFLGRRLVVG
REFGDQVNFA EDVVTGSLPR DGLSQSCEWV TKVLDDNADL AAQRTVAAKG EKLYMRTRNA
ASLESAKRSK QVVSSDNWTS VHPLFQDETS NLEAEREKML ARIGGYRPPE TIFEVNNRRM
GKHENVDALD TIKRVRSTLE SKKKPFSDED DDVPTGVADN MSMASDSELE VTFSSYSKSK
DNKAKKASAA SFQNPEYFMS YTPNNTSLAE DRAYGVHSGT NSNFAQASRS ATMDLAGDDG
GRGFGEARTL MRWDKRHKKY VARQNDEDGS KGTRLVRGES GAKIAASFRS GRFDAWKREN
RLGRLPRVAI SGKRFRHRKE QAPKKADPLR GDYEKMKKKA ELAKERAMSK AGGAAPRGKS
ELKSTDDIRI ARKLKQKRRE KNARPSRKK