DBP10_ASPOR
ID DBP10_ASPOR Reviewed; 929 AA.
AC Q2UHC1;
DT 04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=ATP-dependent RNA helicase dbp10;
DE EC=3.6.4.13;
GN Name=dbp10; ORFNames=AO090023000504;
OS Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=510516;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 42149 / RIB 40;
RX PubMed=16372010; DOI=10.1038/nature04300;
RA Machida M., Asai K., Sano M., Tanaka T., Kumagai T., Terai G., Kusumoto K.,
RA Arima T., Akita O., Kashiwagi Y., Abe K., Gomi K., Horiuchi H.,
RA Kitamoto K., Kobayashi T., Takeuchi M., Denning D.W., Galagan J.E.,
RA Nierman W.C., Yu J., Archer D.B., Bennett J.W., Bhatnagar D.,
RA Cleveland T.E., Fedorova N.D., Gotoh O., Horikawa H., Hosoyama A.,
RA Ichinomiya M., Igarashi R., Iwashita K., Juvvadi P.R., Kato M., Kato Y.,
RA Kin T., Kokubun A., Maeda H., Maeyama N., Maruyama J., Nagasaki H.,
RA Nakajima T., Oda K., Okada K., Paulsen I., Sakamoto K., Sawano T.,
RA Takahashi M., Takase K., Terabayashi Y., Wortman J.R., Yamada O.,
RA Yamagata Y., Anazawa H., Hata Y., Koide Y., Komori T., Koyama Y.,
RA Minetoki T., Suharnan S., Tanaka A., Isono K., Kuhara S., Ogasawara N.,
RA Kikuchi H.;
RT "Genome sequencing and analysis of Aspergillus oryzae.";
RL Nature 438:1157-1161(2005).
CC -!- FUNCTION: ATP-binding RNA helicase involved in the biogenesis of 60S
CC ribosomal subunits and is required for the normal formation of 25S and
CC 5.8S rRNAs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC subfamily. {ECO:0000305}.
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DR EMBL; AP007157; BAE59044.1; -; Genomic_DNA.
DR RefSeq; XP_001821046.1; XM_001820994.2.
DR AlphaFoldDB; Q2UHC1; -.
DR SMR; Q2UHC1; -.
DR STRING; 510516.Q2UHC1; -.
DR EnsemblFungi; BAE59044; BAE59044; AO090023000504.
DR GeneID; 5993048; -.
DR KEGG; aor:AO090023000504; -.
DR VEuPathDB; FungiDB:AO090023000504; -.
DR HOGENOM; CLU_003041_5_1_1; -.
DR OMA; MRWDKKS; -.
DR Proteomes; UP000006564; Chromosome 3.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR012541; DBP10_C.
DR InterPro; IPR033517; DDX54/DBP10.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR24031:SF292; PTHR24031:SF292; 1.
DR Pfam; PF08147; DBP10CT; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01123; DBP10CT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing.
FT CHAIN 1..929
FT /note="ATP-dependent RNA helicase dbp10"
FT /id="PRO_0000232310"
FT DOMAIN 120..292
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 358..513
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 639..691
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 853..929
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 89..117
FT /note="Q motif"
FT MOTIF 240..243
FT /note="DEAD box"
FT COMPBIAS 12..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 341..358
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 670..685
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 860..885
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 915..929
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 133..140
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 929 AA; 103096 MW; CF433DC2F9F7EB0A CRC64;
MPHRAASPAA SENEFDITNA LFQNDSDSDN DTSLKQTKRP QKAAPPQALD FLGGDIDDDE
DDEAFIAGQQ ASANRKASNL KGRTVKKGGG FQAMGLNAHL LKAITRKGFS VPTPIQRKTI
PVIMDGQDVV GMARTGSGKT AAFVIPMIEK LKSHSTKVGA RGLILSPSRE LALQTLKVVK
ELGKGTDLKS VLLVGGDSLE EQFSLMAGNP DIVIATPGRF LHLKVEMNLD LSSIRYVVFD
EADRLFEMGF ADQLTEILYG LPANRQTLLF SATLPKSLVE FARAGLQEPT LIRLDTESKI
SPDLENVFFS VKSSEKEGAL LHILHEVIKM PTGPTEAAQR QKEQGDGKNF KNFKKRKRGD
DKAINFQESP TKYSTIVFAA TKHHVDYLYS LLREAGFAVS YAYGSLDQTA RKIQVQNFRA
GLSNILVVTD VAARGIDIPI LANVINYDFP SQPKIFVHRV GRTARAGRKG WSYSLVRDAD
APYMLDLQLF LGRRLVIGRE HGDQVNFAED VVVGSLPRDG LSTSCEWVTK VLENEADIYS
QRTIAGKGEK LYMRTRNSAS LESAKRAKQV VSSDNWTAVH PLFNDQGSQM ELEREKMLAR
IGGYRPQETI FEVHNRRNGK HEGDEAIDTI KRIRTTVDYK KKKREMAEKQ SDFVEDASSG
NKGEANETEE TGAQPDEDEE DIGEGVPDNM SMASESDLEV TFSSYNGGKA KKDSAASFQN
PEYFMSYTPS STNLAEDRAY GVHTGTNANF TQASRSATMD LLGDEGARGF AEPRTMMRWD
KRHKKYVSRQ NDEDGSKGTH LVKGESGAKI ASTFRSGRFD AWRKGKRLGR MPRVGEEETP
ALVHDLNTAM RRRRFQHRKE QAPKAADRLR GDYEKMKKKG EAAKQRQLSK AGGAAAGGKS
ELKSTDDIRL ARKLKQQRRE KNARPSRKK