DBP10_NEOFI
ID DBP10_NEOFI Reviewed; 934 AA.
AC A1DNG2;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=ATP-dependent RNA helicase dbp10;
DE EC=3.6.4.13;
GN Name=dbp10; ORFNames=NFIA_056820;
OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164
OS / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=331117;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181
RC / WB 181;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: ATP-binding RNA helicase involved in the biogenesis of 60S
CC ribosomal subunits and is required for the normal formation of 25S and
CC 5.8S rRNAs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC subfamily. {ECO:0000305}.
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DR EMBL; DS027698; EAW16333.1; -; Genomic_DNA.
DR RefSeq; XP_001258230.1; XM_001258229.1.
DR AlphaFoldDB; A1DNG2; -.
DR SMR; A1DNG2; -.
DR STRING; 36630.CADNFIAP00004384; -.
DR EnsemblFungi; EAW16333; EAW16333; NFIA_056820.
DR GeneID; 4584745; -.
DR KEGG; nfi:NFIA_056820; -.
DR VEuPathDB; FungiDB:NFIA_056820; -.
DR eggNOG; KOG0337; Eukaryota.
DR HOGENOM; CLU_003041_5_1_1; -.
DR OMA; MRWDKKS; -.
DR OrthoDB; 268859at2759; -.
DR Proteomes; UP000006702; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR012541; DBP10_C.
DR InterPro; IPR033517; DDX54/DBP10.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR24031:SF292; PTHR24031:SF292; 1.
DR Pfam; PF08147; DBP10CT; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01123; DBP10CT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing.
FT CHAIN 1..934
FT /note="ATP-dependent RNA helicase dbp10"
FT /id="PRO_0000281716"
FT DOMAIN 121..293
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 361..515
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 639..688
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..934
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 90..118
FT /note="Q motif"
FT MOTIF 241..244
FT /note="DEAD box"
FT COMPBIAS 339..358
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 639..669
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 858..891
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 919..934
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 134..141
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 934 AA; 103372 MW; 1241FDC5CF4FDF9C CRC64;
MPHRAASPAM SENEFDITGA LFQNDSDSDN EQPSAKSKRQ PPKKVPSQAL DFLGDVNEDD
DDDEAFIAEQ QTSANRKASN LKGRTVKKGG GFQAMGLSAN LLKAIARKGF SVPTPIQRKT
IPVIMDDQDV VGMARTGSGK TAAFVIPMIE KLKSHSTKVG ARGLILSPSR ELALQTLKVV
KELGRGTDLK SVLLVGGDSL EEQFAMMAGN PDIVIATPGR FLHLKVEMNL DLSSIRYVVF
DEADRLFEMG FAAQLTEILH GLPANRQTLL FSATLPKSLV EFARAGLQEP TLVRLDTESK
ISPDLQNAFF SVKSSEKEGA LLYILQEVIK MPTGPTEVSQ QRKEEDASAK NWKNKKRKRA
EMEKAVNMRE SPTKHSTIVF AATKHHVDYL YSLLSEAGFA VSYVYGSLDQ TARKIQVQNF
RTGMTNILVV TDVAARGIDI PILANVINYD FPSQPKIFIH RVGRTARAGR KGWSYSLVRD
ADAPYLLDLQ LFLGRRLVVG REFGDQVNFA EDVVTGSLPR DGLSQSCEWV TKVLDDNADL
AAQRTVAAKG EKLYMRTRNS ASLESAKRSK QVVSSDNWTS IHPLFQDETS NLEAEREKML
ARIGGYRPPE TIFEVNNRRM GKHENVDALD TIKRVRTTLE SKKKRAQANE KSEFLEDASD
DEKAANEAGE NENEGAFSDE DDDVPTGVAD NMSMASDSEL EVTFSSYSQS KENKAKKASA
ASFQNPEYFM SYTPNNNSLV EDRAYGVHSG TNSNFAQASR SATMDLAGDD GGRGFGEART
LMRWDKRHKK YVARQNDEDG SKGTRLVRGE SGAKIAASFR SGRFDAWKRG NRLGRLPRVG
EAEAPNLTAG LNAAISGKRF RHRKEQAPKR ADPLRGDYEK MKKKAELAKE RAMSKAGGAA
PRGKSELKNT DDIRIARKLK QKRREKNARP SRKK