DBX1B_DANRE
ID DBX1B_DANRE Reviewed; 322 AA.
AC Q9PTU0;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Homeobox protein DBX1-B;
DE AltName: Full=Developing brain homeobox protein 1-B;
DE AltName: Full=Homeobox protein hlx2;
GN Name=dbx1b; Synonyms=hlx2;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RX PubMed=10673033; DOI=10.1016/s0167-4781(99)00187-6;
RA Seo H.-C., Nilsen F., Fjose A.;
RT "Three structurally and functionally conserved Hlx genes in zebrafish.";
RL Biochim. Biophys. Acta 1489:323-335(1999).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108}.
CC -!- DEVELOPMENTAL STAGE: Detected at 6-7 hours post-fertilization (hpf).
CC Levels increase after 10 hpf and highest expression is seen at 24 hpf.
CC {ECO:0000269|PubMed:10673033}.
CC -!- SIMILARITY: Belongs to the H2.0 homeobox family. {ECO:0000305}.
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DR EMBL; AF030285; AAF18562.1; -; mRNA.
DR RefSeq; NP_571253.1; NM_131178.1.
DR AlphaFoldDB; Q9PTU0; -.
DR SMR; Q9PTU0; -.
DR STRING; 7955.ENSDARP00000013350; -.
DR PaxDb; Q9PTU0; -.
DR Ensembl; ENSDART00000180577; ENSDARP00000157556; ENSDARG00000113468.
DR GeneID; 30416; -.
DR KEGG; dre:30416; -.
DR CTD; 30416; -.
DR ZFIN; ZDB-GENE-000128-11; dbx1b.
DR eggNOG; KOG0488; Eukaryota.
DR InParanoid; Q9PTU0; -.
DR OrthoDB; 1439041at2759; -.
DR PhylomeDB; Q9PTU0; -.
DR PRO; PR:Q9PTU0; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR Bgee; ENSDARG00000113468; Expressed in nucleus of thalamus and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0021515; P:cell differentiation in spinal cord; IGI:ZFIN.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR020479; Homeobox_metazoa.
DR InterPro; IPR000047; HTH_motif.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00024; HOMEOBOX.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Homeobox; Nucleus; Reference proteome.
FT CHAIN 1..322
FT /note="Homeobox protein DBX1-B"
FT /id="PRO_0000302846"
FT DNA_BIND 179..238
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 238..266
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 296..322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 322 AA; 35583 MW; 2028BCABE7BBBE3C CRC64;
MMLPSVIAPP AMYPSFLRPS SALSLPPALQ SAFTTHSSFL VEDLLRISRP AAFMHRSIPS
PSASPPATGV TTLNTTSSAV HVAMSTALAK RSSSPQTSIS SDPNYLKFGV NAILASTTRN
ASPPPPVQGM NAKTFPFPCF DGSFHPFIRA SYFPASSSAV PIPGTFAWPL TARGKPRRGM
LRRAVFSDVQ RKALEKMFQK QKYISKPDRK KLATKLGLKD SQVKIWFQNR RMKWRNSKER
ELLSSGGCRE QTLPTKMNPN PDLSDVGKRF EHEAVLRESP RAPFCQSRGD HEFNADLHFK
SPSISSKHSD FSESEDEEIT VS