DCEB_LISMO
ID DCEB_LISMO Reviewed; 464 AA.
AC Q9EYW9; Q8Y4S0; Q9AGQ0;
DT 21-FEB-2002, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2002, sequence version 2.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Glutamate decarboxylase beta;
DE Short=GAD-beta;
DE EC=4.1.1.15;
GN Name=gadB; OrderedLocusNames=lmo2363;
OS Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX NCBI_TaxID=169963;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=EGD5, and LO28 / Serovar 1/2c;
RX PubMed=11309128; DOI=10.1046/j.1365-2958.2001.02398.x;
RA Cotter P.D., Gahan C.G.M., Hill C.;
RT "A glutamate decarboxylase system protects Listeria monocytogenes in
RT gastric fluid.";
RL Mol. Microbiol. 40:465-475(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-679 / EGD-e;
RX PubMed=11679669; DOI=10.1126/science.1063447;
RA Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F.,
RA Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A.,
RA Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E.,
RA Dominguez-Bernal G., Duchaud E., Durant L., Dussurget O., Entian K.-D.,
RA Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W.,
RA Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U.,
RA Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A.,
RA Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B.,
RA Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N.,
RA Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P.;
RT "Comparative genomics of Listeria species.";
RL Science 294:849-852(2001).
CC -!- FUNCTION: Converts internalized glutamate to GABA and increases the
CC internal pH. Involved in glutamate-dependent acid resistance in gastric
CC fluid.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H(+) + L-glutamate = 4-aminobutanoate + CO2;
CC Xref=Rhea:RHEA:17785, ChEBI:CHEBI:15378, ChEBI:CHEBI:16526,
CC ChEBI:CHEBI:29985, ChEBI:CHEBI:59888; EC=4.1.1.15;
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000250};
CC -!- SIMILARITY: Belongs to the group II decarboxylase family.
CC {ECO:0000305}.
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DR EMBL; AF309077; AAG22562.1; -; Genomic_DNA.
DR EMBL; AF329447; AAK17187.1; -; Genomic_DNA.
DR EMBL; AL591983; CAD00441.1; -; Genomic_DNA.
DR PIR; AC1370; AC1370.
DR RefSeq; NP_465886.1; NC_003210.1.
DR RefSeq; WP_009931286.1; NZ_CP023861.1.
DR AlphaFoldDB; Q9EYW9; -.
DR SMR; Q9EYW9; -.
DR STRING; 169963.lmo2363; -.
DR PaxDb; Q9EYW9; -.
DR EnsemblBacteria; CAD00441; CAD00441; CAD00441.
DR GeneID; 985123; -.
DR KEGG; lmo:lmo2363; -.
DR PATRIC; fig|169963.11.peg.2421; -.
DR eggNOG; COG0076; Bacteria.
DR HOGENOM; CLU_019582_2_1_9; -.
DR OMA; TMAPHSE; -.
DR PhylomeDB; Q9EYW9; -.
DR BioCyc; LMON169963:LMO2363-MON; -.
DR Proteomes; UP000000817; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0004351; F:glutamate decarboxylase activity; IBA:GO_Central.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0006538; P:glutamate catabolic process; IBA:GO_Central.
DR Gene3D; 3.40.640.10; -; 1.
DR InterPro; IPR010107; Glutamate_decarboxylase.
DR InterPro; IPR002129; PyrdxlP-dep_de-COase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR PANTHER; PTHR43321; PTHR43321; 1.
DR Pfam; PF00282; Pyridoxal_deC; 1.
DR SUPFAM; SSF53383; SSF53383; 1.
DR TIGRFAMs; TIGR01788; Glu-decarb-GAD; 1.
PE 3: Inferred from homology;
KW Decarboxylase; Lyase; Pyridoxal phosphate; Reference proteome.
FT CHAIN 1..464
FT /note="Glutamate decarboxylase beta"
FT /id="PRO_0000146990"
FT MOD_RES 275
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250"
FT VARIANT 92
FT /note="A -> P (in strain: LO28)"
FT VARIANT 124
FT /note="E -> D (in strain: LO28)"
FT VARIANT 261
FT /note="F -> L (in strain: EGD5)"
FT VARIANT 375
FT /note="C -> R (in strain: EGD5)"
FT VARIANT 380..381
FT /note="DD -> TT (in strain: LO28)"
SQ SEQUENCE 464 AA; 53543 MW; F2E2778CFD1E2C36 CRC64;
MLYSKENKES YLEPVFGSSA EDRDIPKYTL GKEPLEPRIA YRLVKDELLD EGSARQNLAT
FCQTYMEDEA TKLMSETLEK NAIDKSEYPR TAELENRCVN IIADLWHAPK DQKFMGTSTI
GSSEACMLGG MAMKFAWRKR AEKLGLDIYA KKPNLVISSG YQVCWEKFCV YWDIDMRVVP
MDKEHMQLNT DQVLDYVDEY TIGVVGILGI TYTGRYDDIY ALNEKLEEYN SKTDYKVYIH
VDAASGGFFT PFVEPDIIWD FRLKNVISIN TSGHKYGLVY PGIGWVLWKD ESYLPEELIF
KVSYLGGEMP TMQINFSRSA SHIIGQYYNF LRYGFEGYRT IHQKTSDVAQ YLAHAVEQTG
YFDIFNDGSH LPIVCYKLKD DANVNWTLYD LADRLQMRGW QVPAYPLPKS LENIIIQRYV
CRADLGFNMA EEFIQDFQAS IQELNNAHIL FHDTQQSGVH GFTH