DD11_ARATH
ID DD11_ARATH Reviewed; 149 AA.
AC Q9C924;
DT 07-JUN-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Protein DOWN-REGULATED IN DIF1 11 {ECO:0000303|PubMed:17937500};
DE Flags: Precursor;
GN Name=DD11 {ECO:0000303|PubMed:17937500};
GN OrderedLocusNames=At1g52970 {ECO:0000312|Araport:AT1G52970};
GN ORFNames=F14G24.24 {ECO:0000312|EMBL:AAG52284.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF Clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP TISSUE SPECIFICITY.
RC STRAIN=cv. Landsberg erecta;
RX PubMed=17915010; DOI=10.1186/gb-2007-8-10-r204;
RA Johnston A.J., Meier P., Gheyselinck J., Wuest S.E.J., Federer M.,
RA Schlagenhauf E., Becker J.D., Grossniklaus U.;
RT "Genetic subtraction profiling identifies genes essential for Arabidopsis
RT reproduction and reveals interaction between the female gametophyte and the
RT maternal sporophyte.";
RL Genome Biol. 8:R204.1-R204.21(2007).
RN [5]
RP TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=17693534; DOI=10.1105/tpc.107.052076;
RA Punwani J.A., Rabiger D.S., Drews G.N.;
RT "MYB98 positively regulates a battery of synergid-expressed genes encoding
RT filiform apparatus localized proteins.";
RL Plant Cell 19:2557-2568(2007).
RN [6]
RP IDENTIFICATION.
RC STRAIN=cv. Columbia, and cv. Landsberg erecta;
RX PubMed=17937500; DOI=10.1371/journal.pgen.0030171;
RA Jones-Rhoades M.W., Borevitz J.O., Preuss D.;
RT "Genome-wide expression profiling of the Arabidopsis female gametophyte
RT identifies families of small, secreted proteins.";
RL PLoS Genet. 3:1848-1861(2007).
RN [7]
RP TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=18410484; DOI=10.1111/j.1365-313x.2008.03514.x;
RA Punwani J.A., Rabiger D.S., Lloyd A., Drews G.N.;
RT "The MYB98 subcircuit of the synergid gene regulatory network includes
RT genes directly and indirectly regulated by MYB98.";
RL Plant J. 55:406-414(2008).
CC -!- TISSUE SPECIFICITY: Mostly expressed in embryo sac cells
CC (PubMed:17915010). Restricted to synergid cells, especially in the
CC filiform apparatus of mature female gametophyte, via MYB98-mediated
CC transcription regulation (PubMed:17693534, PubMed:18410484). Also
CC detected at low levels in egg and central cells (PubMed:17693534).
CC {ECO:0000269|PubMed:17693534, ECO:0000269|PubMed:17915010,
CC ECO:0000269|PubMed:18410484}.
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DR EMBL; AC019018; AAG52284.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32872.1; -; Genomic_DNA.
DR EMBL; BT029321; ABK32135.1; -; mRNA.
DR RefSeq; NP_175705.1; NM_104175.2.
DR AlphaFoldDB; Q9C924; -.
DR STRING; 3702.AT1G52970.1; -.
DR PaxDb; Q9C924; -.
DR PRIDE; Q9C924; -.
DR ProteomicsDB; 222746; -.
DR EnsemblPlants; AT1G52970.1; AT1G52970.1; AT1G52970.
DR GeneID; 841730; -.
DR Gramene; AT1G52970.1; AT1G52970.1; AT1G52970.
DR KEGG; ath:AT1G52970; -.
DR Araport; AT1G52970; -.
DR TAIR; locus:2011546; AT1G52970.
DR eggNOG; ENOG502R1HH; Eukaryota.
DR HOGENOM; CLU_103514_0_0_1; -.
DR InParanoid; Q9C924; -.
DR OMA; NKCVETT; -.
DR OrthoDB; 1462854at2759; -.
DR PhylomeDB; Q9C924; -.
DR PRO; PR:Q9C924; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C924; baseline and differential.
DR GO; GO:0043680; C:filiform apparatus; IDA:UniProtKB.
DR InterPro; IPR040220; DD11.
DR InterPro; IPR008502; Prolamin-like.
DR PANTHER; PTHR31207; PTHR31207; 1.
DR Pfam; PF05617; Prolamin_like; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..149
FT /note="Protein DOWN-REGULATED IN DIF1 11"
FT /id="PRO_5009973666"
SQ SEQUENCE 149 AA; 16772 MW; 04BA1DED9DE5D287 CRC64;
MEKAILITFL IATTSMVYQT IGQEEEISPI SPESLAYEPA AAYEYDHELL SHMTTRRIKF
LQDCSDKMSS KCNVEMTEGL IDDKPVSEDC CVNFLKIGRE CHEGLMTFVF ATYELKDVAS
AILPRSKRMW NKCVETTAAK IGAPLAFET
