DDAD_ENTAG
ID DDAD_ENTAG Reviewed; 578 AA.
AC E2JA29;
DT 09-DEC-2015, integrated into UniProtKB/Swiss-Prot.
DT 30-NOV-2010, sequence version 1.
DT 03-AUG-2022, entry version 41.
DE RecName: Full=Dapdiamide synthesis protein DdaD {ECO:0000305};
GN Name=ddaD {ECO:0000303|PubMed:20945916};
OS Enterobacter agglomerans (Erwinia herbicola) (Pantoea agglomerans).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Pantoea; Pantoea agglomerans group.
OX NCBI_TaxID=549;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, COFACTOR, BIOPHYSICOCHEMICAL
RP PROPERTIES, PATHWAY, AND PHOSPHOPANTETHEINYLATION AT SER-533.
RC STRAIN=CU0119;
RX PubMed=20945916; DOI=10.1021/ja1072367;
RA Hollenhorst M.A., Bumpus S.B., Matthews M.L., Bollinger J.M. Jr.,
RA Kelleher N.L., Walsh C.T.;
RT "The nonribosomal peptide synthetase enzyme DdaD tethers N(beta)-
RT fumaramoyl-l-2,3-diaminopropionate for Fe(II)/alpha-ketoglutarate-dependent
RT epoxidation by DdaC during dapdiamide antibiotic biosynthesis.";
RL J. Am. Chem. Soc. 132:15773-15781(2010).
CC -!- FUNCTION: Involved in dapdiamide antibiotics biosynthesis. Activates
CC and sequesters N-beta-fumaramoyl-DAP as a covalently tethered thioester
CC for subsequent oxidative modification of the fumaramoyl group.
CC {ECO:0000269|PubMed:20945916}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000269|PubMed:20945916};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=420 uM for N-beta-fumaramoyl-DAP {ECO:0000269|PubMed:20945916};
CC Note=kcat is 64 min(-1). {ECO:0000269|PubMed:20945916};
CC -!- PATHWAY: Antibiotic biosynthesis. {ECO:0000269|PubMed:20945916}.
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000305}.
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DR EMBL; HQ130277; ADN39483.1; -; Genomic_DNA.
DR RefSeq; WP_033781250.1; NZ_JPOT02000004.1.
DR AlphaFoldDB; E2JA29; -.
DR SMR; E2JA29; -.
DR BioCyc; MetaCyc:MON-19478; -.
DR GO; GO:0031177; F:phosphopantetheine binding; IEA:InterPro.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; -; 1.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR020806; PKS_PP-bd.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR006162; Ppantetheine_attach_site.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR Pfam; PF00550; PP-binding; 1.
DR SMART; SM00823; PKS_PP; 1.
DR SUPFAM; SSF47336; SSF47336; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
DR PROSITE; PS50075; CARRIER; 1.
DR PROSITE; PS00012; PHOSPHOPANTETHEINE; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Phosphopantetheine; Phosphoprotein.
FT CHAIN 1..578
FT /note="Dapdiamide synthesis protein DdaD"
FT /id="PRO_0000434794"
FT DOMAIN 498..573
FT /note="Carrier"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 533
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258,
FT ECO:0000269|PubMed:20945916"
SQ SEQUENCE 578 AA; 64048 MW; 4A7D07F2FFCDF99C CRC64;
MHSVETFNLP ALNSLLETTA RRFGNRLAVQ DDNGSLTFAD FVEKVGILSA KLRLVIKRGE
HVAVQLPRGI NYIVAAYAIW EAGGVYLPLD NQWPSSRIEG ILHRSHVRVL IHTSQADQGL
ELTELPAETR AESPVAGTPA YIIHTSGTTG EPKGVVVSHE SLIHLVESHQ RDIYQAYDVT
EGPVAINASF CFDSALERMA LVALGYSLHV VSDQVRKSPY ELVKYLRDNS IVNVDLVPSH
LKVLLSAGLN EKCDALRLVI VGGEAIDAEL WREIVQNQAI YINVYGPTEN TINTSFCEIR
GETPHIGRPF KNVTCLLLNE NGERCAAGEE GELLVAGRHL AQGYYNAPDL TDRVFVHIDG
IRYYRTGDRV RQNEQGNLLY LGRIDDQVKI NGFRIELADV QHNLTQLPGV KYAAVTPIKL
PTGQGLLASI VWNSDAPEQT FSNLEALLGE KLPSYMVPTR WQKLDALPLT DNLKLDHKSL
LSHWKNSQEQ IGEKFAAESI SATEHQIKNL WQKILRQPSL SPDAHFFASG GDSMAAMTLL
VELKKVTPQD VSLGDIFKYP TIRKMAAWLD ASSVQAES