DDDI_BURC1
ID DDDI_BURC1 Reviewed; 123 AA.
AC P0DUH6;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 07-APR-2021, sequence version 1.
DT 25-MAY-2022, entry version 4.
DE RecName: Full=Double-stranded DNA deaminase immunity protein {ECO:0000305};
DE Short=DddI {ECO:0000303|PubMed:32641830};
GN Name=dddI {ECO:0000303|PubMed:32641830}; ORFNames=I35_7838.5;
OS Burkholderia cenocepacia (strain H111).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX NCBI_TaxID=1055524;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=H111;
RX PubMed=24723723; DOI=10.1128/genomea.00298-14;
RA Carlier A., Agnoli K., Pessi G., Suppiger A., Jenul C., Schmid N.,
RA Tuemmler B., Pinto-Carbo M., Eberl L.;
RT "Genome Sequence of Burkholderia cenocepacia H111, a Cystic Fibrosis Airway
RT Isolate.";
RL Genome Announc. 2:0-0(2014).
RN [2] {ECO:0007744|PDB:6U08}
RP X-RAY CRYSTALLOGRAPHY (2.49 ANGSTROMS) IN COMPLEX WITH DDDA TOXIN DOMAIN,
RP FUNCTION, SUBUNIT, AND DISRUPTION PHENOTYPE.
RC STRAIN=H111;
RX PubMed=32641830; DOI=10.1038/s41586-020-2477-4;
RA Mok B.Y., de Moraes M.H., Zeng J., Bosch D.E., Kotrys A.V., Raguram A.,
RA Hsu F., Radey M.C., Peterson S.B., Mootha V.K., Mougous J.D., Liu D.R.;
RT "A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial
RT base editing.";
RL Nature 583:631-637(2020).
CC -!- FUNCTION: Immunity protein component of a toxin-immunity protein
CC module, which functions as a cellular contact-dependent growth
CC inhibition (CDI) system. CDI modules allow bacteria to communicate with
CC and inhibit the growth of closely related neighboring bacteria in a
CC contact-dependent fashion. Bacteria that have this module inhibit or
CC kill bacteria without it, giving them a growth advantage. Specifically
CC inhibits the toxic activity of cognate toxin DddA (C-terminal 163
CC residue fragment) upon expression in E.coli.
CC {ECO:0000305|PubMed:32641830}.
CC -!- SUBUNIT: The toxic domain forms a 1:1 complex with the DddI immunity
CC protein. This protein blocks the active site of the toxin.
CC {ECO:0000269|PubMed:32641830}.
CC -!- DISRUPTION PHENOTYPE: A double dddA-dddI deletion has a 100-fold growth
CC disadvantage compared to wild-type in competition experiments.
CC {ECO:0000269|PubMed:32641830}.
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DR EMBL; HG938372; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; WP_043205978.1; NZ_HG938372.1.
DR PDB; 6U08; X-ray; 2.49 A; B/D/F/H=1-123.
DR PDBsum; 6U08; -.
DR AlphaFoldDB; P0DUH6; -.
DR SMR; P0DUH6; -.
DR InterPro; IPR025680; DddI.
DR Pfam; PF14430; Imm1; 1.
PE 1: Evidence at protein level;
KW 3D-structure.
FT CHAIN 1..123
FT /note="Double-stranded DNA deaminase immunity protein"
FT /id="PRO_0000452478"
SQ SEQUENCE 123 AA; 13916 MW; 23B81C5ABA6028AF CRC64;
MYADDFDGEI EIDEVDSLVE FLSRRPAFDA NNFVLTFEES GFPQLNIFAK NDIAVVYYMD
IGENFVSKGN SASGGTEKFY ENKLGGEVDL SKDCVVSKEQ MIEAAKQFFA TKQRPEQLTW
SEL