DDMB_STEMA
ID DDMB_STEMA Reviewed; 105 AA.
AC Q5S3I4;
DT 10-OCT-2018, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 63.
DE RecName: Full=Dicamba O-demethylase, ferredoxin component {ECO:0000303|PubMed:16535584};
GN Name=ddmB {ECO:0000303|PubMed:15855162};
OS Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas
OS maltophilia).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.
OX NCBI_TaxID=40324;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND SUBUNIT.
RC STRAIN=DI-6 {ECO:0000312|EMBL:AAV53698.1};
RX PubMed=15855162; DOI=10.1074/jbc.m500597200;
RA Herman P.L., Behrens M., Chakraborty S., Chrastil B.M., Barycki J.,
RA Weeks D.P.;
RT "A three-component dicamba O-demethylase from Pseudomonas maltophilia,
RT strain DI-6: gene isolation, characterization, and heterologous
RT expression.";
RL J. Biol. Chem. 280:24759-24767(2005).
RN [2]
RP PROTEIN SEQUENCE OF 1-26, FUNCTION, COFACTOR, AND SUBUNIT.
RC STRAIN=DI-6;
RX PubMed=15820213; DOI=10.1016/j.abb.2005.02.024;
RA Chakraborty S., Behrens M., Herman P.L., Arendsen A.F., Hagen W.R.,
RA Carlson D.L., Wang X.Z., Weeks D.P.;
RT "A three-component dicamba O-demethylase from Pseudomonas maltophilia,
RT strain DI-6: purification and characterization.";
RL Arch. Biochem. Biophys. 437:20-28(2005).
RN [3]
RP FUNCTION, AND SUBUNIT.
RC STRAIN=DI-6;
RX PubMed=16535584; DOI=10.1128/aem.63.4.1623-1626.1997;
RA Wang X., Li B., Herman P.L., Weeks D.P.;
RT "A three-component enzyme system catalyzes the O-demethylation of the
RT herbicide dicamba in Pseudomonas maltophilia DI-6.";
RL Appl. Environ. Microbiol. 63:1623-1626(1997).
CC -!- FUNCTION: Component of the dicamba O-demethylase multicomponent enzyme
CC system involved in the degradation of the herbicide dicamba
CC (PubMed:15855162, PubMed:15820213, PubMed:16535584). In vitro,
CC functions as an intermediate electron transfer protein
CC (PubMed:15855162, PubMed:15820213, PubMed:16535584).
CC {ECO:0000269|PubMed:15820213, ECO:0000269|PubMed:15855162,
CC ECO:0000269|PubMed:16535584}.
CC -!- COFACTOR:
CC Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:190135;
CC Evidence={ECO:0000269|PubMed:15820213};
CC Note=Binds 1 [2Fe-2S] cluster. {ECO:0000250|UniProtKB:P80306};
CC -!- SUBUNIT: Monomer (PubMed:15820213). The dicamba O-demethylase
CC multicomponent enzyme system is composed of an oxygenase component
CC (DdmC) and an electron transfer component formed by a ferredoxin
CC reductase (DdmA1) and a ferredoxin (DdmB) (PubMed:15855162,
CC PubMed:15820213, PubMed:16535584). In vitro, dicamba O-demethylase
CC assays in which DdmA2 is substituted for DdmA1 demonstrate that the two
CC enzymes possess nearly identical activities (PubMed:15855162).
CC {ECO:0000269|PubMed:15820213, ECO:0000269|PubMed:15855162,
CC ECO:0000269|PubMed:16535584}.
CC -!- SIMILARITY: Belongs to the adrenodoxin/putidaredoxin family.
CC {ECO:0000305}.
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DR EMBL; AY786442; AAV53698.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5S3I4; -.
DR SMR; Q5S3I4; -.
DR GO; GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0140647; P:P450-containing electron transport chain; IEA:InterPro.
DR CDD; cd00207; fer2; 1.
DR Gene3D; 3.10.20.30; -; 1.
DR InterPro; IPR036010; 2Fe-2S_ferredoxin-like_sf.
DR InterPro; IPR001041; 2Fe-2S_ferredoxin-type.
DR InterPro; IPR001055; Adrenodoxin.
DR InterPro; IPR012675; Beta-grasp_dom_sf.
DR PANTHER; PTHR23426; PTHR23426; 1.
DR Pfam; PF00111; Fer2; 1.
DR PRINTS; PR00355; ADRENODOXIN.
DR SUPFAM; SSF54292; SSF54292; 1.
DR PROSITE; PS51085; 2FE2S_FER_2; 1.
PE 1: Evidence at protein level;
KW 2Fe-2S; Direct protein sequencing; Electron transport; Iron; Iron-sulfur;
KW Metal-binding; Transport.
FT CHAIN 1..105
FT /note="Dicamba O-demethylase, ferredoxin component"
FT /id="PRO_0000445254"
FT DOMAIN 2..105
FT /note="2Fe-2S ferredoxin-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00465"
FT BINDING 40
FT /ligand="[2Fe-2S] cluster"
FT /ligand_id="ChEBI:CHEBI:190135"
FT /evidence="ECO:0000250|UniProtKB:P80306"
FT BINDING 46
FT /ligand="[2Fe-2S] cluster"
FT /ligand_id="ChEBI:CHEBI:190135"
FT /evidence="ECO:0000250|UniProtKB:P80306"
FT BINDING 49
FT /ligand="[2Fe-2S] cluster"
FT /ligand_id="ChEBI:CHEBI:190135"
FT /evidence="ECO:0000250|UniProtKB:P80306"
FT BINDING 86
FT /ligand="[2Fe-2S] cluster"
FT /ligand_id="ChEBI:CHEBI:190135"
FT /evidence="ECO:0000250|UniProtKB:P80306"
SQ SEQUENCE 105 AA; 11421 MW; 1091FE9A889F73C8 CRC64;
MPQITVVNQS GEESSVEASE GRTLMEVIRD SGFDELLALC GGCCSCATCH VHIDPAFMDK
LPEMSEDEND LLDSSDHRNE YSRLSCQIPV TGALEGIKVT IAQED