DDPS3_ARATH
ID DDPS3_ARATH Reviewed; 302 AA.
AC Q8RX73; Q9LUY3;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Dehydrodolichyl diphosphate synthase 3;
DE Short=Dedol-PP synthase 3;
DE EC=2.5.1.-;
GN OrderedLocusNames=At5g58780; ORFNames=MZN1.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: Catalyzes cis-prenyl chain elongation to produce the
CC polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for
CC the biosynthesis of several classes of glycoprotein. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC -!- SIMILARITY: Belongs to the UPP synthase family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97346.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB020755; BAA97346.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED97097.1; -; Genomic_DNA.
DR EMBL; AY090344; AAL91250.1; -; mRNA.
DR EMBL; BT004518; AAO42764.1; -; mRNA.
DR RefSeq; NP_568882.1; NM_125265.3.
DR AlphaFoldDB; Q8RX73; -.
DR SMR; Q8RX73; -.
DR STRING; 3702.AT5G58780.1; -.
DR PaxDb; Q8RX73; -.
DR PRIDE; Q8RX73; -.
DR ProteomicsDB; 224604; -.
DR EnsemblPlants; AT5G58780.1; AT5G58780.1; AT5G58780.
DR GeneID; 835992; -.
DR Gramene; AT5G58780.1; AT5G58780.1; AT5G58780.
DR KEGG; ath:AT5G58780; -.
DR Araport; AT5G58780; -.
DR TAIR; locus:2178838; AT5G58780.
DR eggNOG; KOG1602; Eukaryota.
DR HOGENOM; CLU_038505_1_0_1; -.
DR InParanoid; Q8RX73; -.
DR OMA; MEHALTH; -.
DR OrthoDB; 1362420at2759; -.
DR PhylomeDB; Q8RX73; -.
DR BioCyc; ARA:AT5G58780-MON; -.
DR UniPathway; UPA00378; -.
DR PRO; PR:Q8RX73; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8RX73; baseline and differential.
DR Genevisible; Q8RX73; AT.
DR GO; GO:0009570; C:chloroplast stroma; IBA:GO_Central.
DR GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR GO; GO:0045547; F:dehydrodolichyl diphosphate synthase activity; IBA:GO_Central.
DR GO; GO:0002094; F:polyprenyltransferase activity; IDA:TAIR.
DR GO; GO:0050267; F:rubber cis-polyprenylcistransferase activity; IGI:TAIR.
DR GO; GO:0009668; P:plastid membrane organization; IBA:GO_Central.
DR GO; GO:0016094; P:polyprenol biosynthetic process; IBA:GO_Central.
DR GO; GO:0006486; P:protein glycosylation; IEA:UniProtKB-UniPathway.
DR GO; GO:0009409; P:response to cold; IEP:TAIR.
DR CDD; cd00475; Cis_IPPS; 1.
DR Gene3D; 3.40.1180.10; -; 1.
DR HAMAP; MF_01139; ISPT; 1.
DR InterPro; IPR001441; UPP_synth-like.
DR InterPro; IPR018520; UPP_synth-like_CS.
DR InterPro; IPR036424; UPP_synth-like_sf.
DR PANTHER; PTHR10291; PTHR10291; 1.
DR Pfam; PF01255; Prenyltransf; 1.
DR SUPFAM; SSF64005; SSF64005; 1.
DR TIGRFAMs; TIGR00055; uppS; 1.
DR PROSITE; PS01066; UPP_SYNTHASE; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Transferase.
FT CHAIN 1..302
FT /note="Dehydrodolichyl diphosphate synthase 3"
FT /id="PRO_0000123753"
SQ SEQUENCE 302 AA; 35195 MW; E99370F7F0867BBF CRC64;
MLSILSSLLS LLFLFIISCF FITSHFWFPL SLPKILGFIK ITSSRDDYDN EQRDEGTYVV
GVEELQRELM PRHVAVIMDG NRRWAKRAGL LTSQGHEAGA KRLIEFSELC FKLGIHTVSA
FAFSTENWGR HKIEVKCLMS LIQHYLKSKI QYFQREETRV SVIGNLTKIP ESLLRTVQEI
EEATRSYKKK HLILAIDYSG RLDILRACKS IVKKSEKGLI REEDVDEALI ERELLTNCTE
FPSPDLLIRT SGEQRISNFF LWQLAYTELF FSPVLWPDFD KDKLLEALVS YQRRERRFGC
RV