DEF1_RAPSA
ID DEF1_RAPSA Reviewed; 80 AA.
AC P69241; P30225; Q41163;
DT 15-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 58.
DE RecName: Full=Defensin-like protein 1;
DE AltName: Full=Cysteine-rich antifungal protein 1;
DE Short=AFP1;
DE Flags: Precursor;
GN Name=AFP1;
OS Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus.
OX NCBI_TaxID=3726;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Ronde Rode Kleine Witpunt; TISSUE=Seed;
RX PubMed=7780308; DOI=10.2307/3870116;
RA Terras F.R.G., Eggermont K., Kovaleva V., Raikhel N.V., Osborn R.W.,
RA Kester A., Rees S.B., Torrekens S., van Leuven F., Vanderleyden J.,
RA Cammue B.P.A., Broekaert W.F.;
RT "Small cysteine-rich antifungal proteins from radish: their role in host
RT defense.";
RL Plant Cell 7:573-588(1995).
RN [2]
RP PROTEIN SEQUENCE OF 30-73.
RC TISSUE=Seed;
RX PubMed=1639777; DOI=10.1016/s0021-9258(19)49534-3;
RA Terras F.R.G., Schoofs H.M.E., de Bolle M.F.C., van Leuven F., Rees S.B.,
RA Vanderleyden J., Cammue B.P.A., Broekaert W.F.;
RT "Analysis of two novel classes of plant antifungal proteins from radish
RT (Raphanus sativus L.) seeds.";
RL J. Biol. Chem. 267:15301-15309(1992).
RN [3]
RP STRUCTURE BY NMR OF 30-80, AND DISULFIDE BONDS.
RX PubMed=9636715; DOI=10.1006/jmbi.1998.1767;
RA Fant F., Vranken W.F., Broekaert W.F., Borremans F.A.M.;
RT "Determination of the three-dimensional solution structure of Raphanus
RT sativus antifungal protein 1 by 1H NMR.";
RL J. Mol. Biol. 279:257-270(1998).
CC -!- FUNCTION: Possesses antifungal activity sensitive to inorganic cations.
CC -!- SUBUNIT: Forms oligomers in its native state.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}.
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DR EMBL; U18557; AAA69541.1; -; mRNA.
DR PIR; T10176; T10176.
DR RefSeq; XP_018469135.1; XM_018613633.1.
DR PDB; 1AYJ; NMR; -; A=31-80.
DR PDBsum; 1AYJ; -.
DR AlphaFoldDB; P69241; -.
DR BMRB; P69241; -.
DR SMR; P69241; -.
DR TCDB; 1.C.45.1.1; the plant defensin (plant defensin) family.
DR GeneID; 108840814; -.
DR KEGG; rsz:108840814; -.
DR OrthoDB; 1565340at2759; -.
DR EvolutionaryTrace; P69241; -.
DR Proteomes; UP000504610; Unplaced.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR GO; GO:0031640; P:killing of cells of another organism; IEA:UniProtKB-KW.
DR CDD; cd00107; Knot1; 1.
DR Gene3D; 3.30.30.10; -; 1.
DR InterPro; IPR008176; Defensin_plant.
DR InterPro; IPR003614; Scorpion_toxin-like.
DR InterPro; IPR036574; Scorpion_toxin-like_sf.
DR SMART; SM00505; Knot1; 1.
DR SUPFAM; SSF57095; SSF57095; 1.
DR PROSITE; PS00940; GAMMA_THIONIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Antimicrobial; Direct protein sequencing; Disulfide bond;
KW Fungicide; Plant defense; Pyrrolidone carboxylic acid; Reference proteome;
KW Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000269|PubMed:1639777"
FT CHAIN 30..80
FT /note="Defensin-like protein 1"
FT /id="PRO_0000007034"
FT MOD_RES 30
FT /note="Pyrrolidone carboxylic acid"
FT /evidence="ECO:0000250|UniProtKB:P30231"
FT DISULFID 33..80
FT /evidence="ECO:0000269|PubMed:9636715,
FT ECO:0007744|PDB:1AYJ"
FT DISULFID 44..65
FT /evidence="ECO:0000269|PubMed:9636715,
FT ECO:0007744|PDB:1AYJ"
FT DISULFID 50..74
FT /evidence="ECO:0000269|PubMed:9636715,
FT ECO:0007744|PDB:1AYJ"
FT DISULFID 54..76
FT /evidence="ECO:0000269|PubMed:9636715,
FT ECO:0007744|PDB:1AYJ"
FT STRAND 33..36
FT /evidence="ECO:0007829|PDB:1AYJ"
FT HELIX 47..57
FT /evidence="ECO:0007829|PDB:1AYJ"
FT STRAND 63..66
FT /evidence="ECO:0007829|PDB:1AYJ"
FT STRAND 69..71
FT /evidence="ECO:0007829|PDB:1AYJ"
FT STRAND 73..78
FT /evidence="ECO:0007829|PDB:1AYJ"
SQ SEQUENCE 80 AA; 8734 MW; 05B90FAAC8DA6C2B CRC64;
MAKFASIIAL LFAALVLFAA FEAPTMVEAQ KLCERPSGTW SGVCGNNNAC KNQCINLEKA
RHGSCNYVFP AHKCICYFPC