DEGS1_CAEEL
ID DEGS1_CAEEL Reviewed; 360 AA.
AC O44186;
DT 06-MAR-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Putative sphingolipid delta(4)-desaturase;
DE EC=1.14.19.17 {ECO:0000250|UniProtKB:O15121};
GN ORFNames=F33D4.4;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Acts as a sphingolipid delta(4)-desaturase. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=an N-acylsphinganine + 2 Fe(II)-[cytochrome b5] + 2 H(+) + O2
CC = an N-acylsphing-4-enine + 2 Fe(III)-[cytochrome b5] + 2 H2O;
CC Xref=Rhea:RHEA:46544, Rhea:RHEA-COMP:10438, Rhea:RHEA-COMP:10439,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:29033, ChEBI:CHEBI:29034, ChEBI:CHEBI:31488,
CC ChEBI:CHEBI:52639; EC=1.14.19.17;
CC Evidence={ECO:0000250|UniProtKB:O15121};
CC -!- PATHWAY: Lipid metabolism; sphingolipid metabolism.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the fatty acid desaturase type 1 family. DEGS
CC subfamily. {ECO:0000305}.
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DR EMBL; FO080445; CCD63769.1; -; Genomic_DNA.
DR PIR; T32554; T32554.
DR RefSeq; NP_501256.1; NM_068855.4.
DR AlphaFoldDB; O44186; -.
DR STRING; 6239.F33D4.4.1; -.
DR EPD; O44186; -.
DR PaxDb; O44186; -.
DR PeptideAtlas; O44186; -.
DR EnsemblMetazoa; F33D4.4.1; F33D4.4.1; WBGene00017996.
DR EnsemblMetazoa; F33D4.4.2; F33D4.4.2; WBGene00017996.
DR GeneID; 177548; -.
DR KEGG; cel:CELE_F33D4.4; -.
DR UCSC; F33D4.4.1; c. elegans.
DR CTD; 177548; -.
DR WormBase; F33D4.4; CE17034; WBGene00017996; -.
DR eggNOG; KOG2987; Eukaryota.
DR GeneTree; ENSGT00390000013448; -.
DR HOGENOM; CLU_032156_0_0_1; -.
DR InParanoid; O44186; -.
DR OMA; FIWVLLQ; -.
DR OrthoDB; 1255438at2759; -.
DR PhylomeDB; O44186; -.
DR Reactome; R-CEL-1660661; Sphingolipid de novo biosynthesis.
DR Reactome; R-CEL-6798695; Neutrophil degranulation.
DR UniPathway; UPA00222; -.
DR PRO; PR:O44186; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00017996; Expressed in adult organism and 4 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0042284; F:sphingolipid delta-4 desaturase activity; IBA:GO_Central.
DR GO; GO:0046513; P:ceramide biosynthetic process; IBA:GO_Central.
DR CDD; cd03508; Delta4-sphingolipid-FADS-like; 1.
DR InterPro; IPR011388; DES1/DES2.
DR InterPro; IPR005804; FA_desaturase_dom.
DR InterPro; IPR013866; Sphingolipid_d4-desaturase_N.
DR Pfam; PF00487; FA_desaturase; 1.
DR Pfam; PF08557; Lipid_DES; 1.
DR PIRSF; PIRSF017228; Sphnglp_dlt4_des; 1.
DR SMART; SM01269; Lipid_DES; 1.
PE 3: Inferred from homology;
KW Lipid metabolism; Membrane; Oxidoreductase; Reference proteome;
KW Sphingolipid metabolism; Transmembrane; Transmembrane helix.
FT CHAIN 1..360
FT /note="Putative sphingolipid delta(4)-desaturase"
FT /id="PRO_0000421294"
FT TRANSMEM 42..62
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 103..123
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 186..206
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 210..230
FT /note="Helical"
FT /evidence="ECO:0000255"
FT MOTIF 90..94
FT /note="Histidine box-1"
FT /evidence="ECO:0000305"
FT MOTIF 129..133
FT /note="Histidine box-2"
FT /evidence="ECO:0000305"
FT MOTIF 260..264
FT /note="Histidine box-3"
FT /evidence="ECO:0000305"
SQ SEQUENCE 360 AA; 41686 MW; F2ABB45F74FD3E6D CRC64;
MGQAPAKEED FSWAYTEEPH ASRRKEILAK YPQIKELFGQ DKAFRPVVVC MVIAQIVFAY
LLRDSDWLLI LFQAYFVSGT INHSLTLAVH EISHNQAFGT NRPLANRIFG FIANLPMCIP
MSISFKKYHL EHHRNLGEDV IDTDVPTEFE AKVFRTWLGK MIWMSLQPLF YGIRPFMLYP
KSMTDLELIN VAIQLLFSTF IYTQFGAKSF FFLFGGLVLG MGLHPCAGHF VSEHYVFKKD
QETYSYYGPI NMVVFNVGYH VEHHDFPYIT GSNLPKVREI APEYYQDWQT HDSWVGMMAD
FIFNPKMTLR KRIKRKYAKP DQFSFYGTGP YETSHVYQSI ANVVNMLTGF GGRKSVVKCD