DEN11_RAT
ID DEN11_RAT Reviewed; 455 AA.
AC Q0PGW2;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=DENN domain-containing protein 11 {ECO:0000305};
DE Short=DENND11;
DE AltName: Full=Protein LCHN {ECO:0000303|PubMed:17394467};
GN Name=Dennd11; Synonyms=Lchn {ECO:0000303|PubMed:17394467};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INDUCTION, AND TISSUE SPECIFICITY.
RC STRAIN=Wistar;
RX PubMed=17394467; DOI=10.1111/j.1471-4159.2006.04374.x;
RA Zhang G., Jung B.P., Ho W., Jugloff D.G.M., Cheung H.H., Gurd J.W.,
RA Wallace M.C., Eubanks J.H.;
RT "Isolation and characterization of LCHN: a novel factor induced by
RT transient global ischemia in the adult rat hippocampus.";
RL J. Neurochem. 101:263-273(2007).
CC -!- FUNCTION: Probable guanine nucleotide exchange factor (GEF). May
CC promote the exchange of GDP to GTP, converting inactive GDP-bound small
CC GTPases into their active GTP-bound form (Probable). May play a role in
CC neuritogenesis, as well as in neuronal recovery and/or restructuring in
CC the hippocampus following transient cerebral ischemia.
CC {ECO:0000269|PubMed:17394467, ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed within the somatodendritic compartment of
CC neurons, is also present on dendritic growth cones, but is not found in
CC astrocytes. {ECO:0000269|PubMed:17394467}.
CC -!- INDUCTION: By transient cerebral ischemia.
CC {ECO:0000269|PubMed:17394467}.
CC -!- SIMILARITY: Belongs to the DENND11 family. {ECO:0000305}.
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DR EMBL; DQ836251; ABH04324.1; -; mRNA.
DR RefSeq; NP_001038166.1; NM_001044701.1.
DR RefSeq; XP_006236423.2; XM_006236361.3.
DR AlphaFoldDB; Q0PGW2; -.
DR STRING; 10116.ENSRNOP00000015921; -.
DR SwissPalm; Q0PGW2; -.
DR jPOST; Q0PGW2; -.
DR PaxDb; Q0PGW2; -.
DR Ensembl; ENSRNOT00000015921; ENSRNOP00000015921; ENSRNOG00000011854.
DR GeneID; 312270; -.
DR KEGG; rno:312270; -.
DR UCSC; RGD:1563986; rat.
DR CTD; 57189; -.
DR RGD; 1563986; RGD1563986.
DR eggNOG; KOG4704; Eukaryota.
DR GeneTree; ENSGT00590000083189; -.
DR HOGENOM; CLU_049607_0_0_1; -.
DR InParanoid; Q0PGW2; -.
DR OMA; TGNMVEW; -.
DR OrthoDB; 1439536at2759; -.
DR PhylomeDB; Q0PGW2; -.
DR TreeFam; TF329174; -.
DR PRO; PR:Q0PGW2; -.
DR Proteomes; UP000002494; Chromosome 4.
DR Bgee; ENSRNOG00000011854; Expressed in cerebellum and 18 other tissues.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005085; F:guanyl-nucleotide exchange factor activity; IEA:UniProtKB-KW.
DR InterPro; IPR018626; LCHN/Anr2.
DR InterPro; IPR037516; Tripartite_DENN.
DR Pfam; PF09804; DENND11; 1.
DR PROSITE; PS50211; DENN; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Guanine-nucleotide releasing factor; Methylation;
KW Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:A4D1U4"
FT CHAIN 2..455
FT /note="DENN domain-containing protein 11"
FT /id="PRO_0000315223"
FT DOMAIN 15..187
FT /note="uDENN"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00304"
FT DOMAIN 214..362
FT /note="cDENN"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00304"
FT DOMAIN 364..455
FT /note="dDENN"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00304"
FT REGION 21..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 2
FT /note="N-acetylvaline"
FT /evidence="ECO:0000250|UniProtKB:A4D1U4"
FT MOD_RES 41
FT /note="Omega-N-methylarginine"
FT /evidence="ECO:0000250|UniProtKB:A4D1U4"
SQ SEQUENCE 455 AA; 51370 MW; C99B6E05D1079436 CRC64;
MVEQGDAAPL LRWAEGPAVS VPQDPALQAG GWVRGGSGGG RVAAEAPRRR EPEEPAPPEV
LLQPGRLELG DVEEDQVVAV FVVTFDPRSG NMVEWCLPQD IDLEGVEFKS MASGSHKVQS
DFIYFRKGPF FGLACFANMP VESELERGAR MKSVGILSPS YTLLYRYMHF LENQVRHQLE
MPGHYSHLAA FYEDKKGVLH AGPGRGGSLP PVYWLPSIHR YMYPEMKITH PAGCMSQFIK
FFGEQILILW KFALLRKRIL IFSPPPVGVV CYRVYCCCCL ANVSLPGIGG TIPESKPFFY
VNVADIESLE VEVSYVACTT EKIFEEKREL YDVYVDNQNV KTHHDHLQPL LKLNSADREK
YRRLNEQRQM LLYSQEVEGD YSPCEEDLFV LFFLEQNNRI FQTLLEVSAS QDKTLTAEHA
RGMGLDPQGD RSFLMDLLEA YGIDVMLVID NPCCP