DEP4_ALTBR
ID DEP4_ALTBR Reviewed; 581 AA.
AC D2E9W9;
DT 25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT 09-FEB-2010, sequence version 1.
DT 03-AUG-2022, entry version 33.
DE RecName: Full=FAD-dependent monooxygenase DEP4 {ECO:0000303|PubMed:19737099};
DE EC=1.-.-.- {ECO:0000305|PubMed:19737099};
DE AltName: Full=Depudecin biosynthesis cluster protein 1 {ECO:0000303|PubMed:19737099};
GN Name=DEP4 {ECO:0000303|PubMed:19737099};
OS Alternaria brassicicola (Dark leaf spot agent).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria;
OC Alternaria sect. Brassicicola.
OX NCBI_TaxID=29001;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], DISRUPTION PHENOTYPE, FUNCTION,
RP INDUCTION, AND PATHWAY.
RC STRAIN=MUCL 202097;
RX PubMed=19737099; DOI=10.1094/mpmi-22-10-1258;
RA Wight W.D., Kim K.-H., Lawrence C.B., Walton J.D.;
RT "Biosynthesis and role in virulence of the histone deacetylase inhibitor
RT depudecin from Alternaria brassicicola.";
RL Mol. Plant Microbe Interact. 22:1258-1267(2009).
CC -!- FUNCTION: FAD-dependent monooxygenase; part of the gene cluster that
CC mediates the biosynthesis of depudecin, a highly oxidized eleven-carbon
CC linear polyketide that acts as a histone deacetylase (HDAC) inhibitor
CC and makes a small contribution to pathogenesis (PubMed:19737099). The
CC reducing polyketide synthase DEP5 is the central enzyme in depudecin
CC biosynthesis by yielding the backbone polyketide chain
CC (PubMed:19737099). The monooxygenases DEP2 and DEP4, as well as the
CC uncharacterized protein DEP1, then act as tailoring enzymes to modify
CC the intermediate polyketide chain into depudecin (PubMed:19737099).
CC {ECO:0000269|PubMed:19737099}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692; Evidence={ECO:0000305};
CC -!- PATHWAY: Polyketide biosynthesis. {ECO:0000269|PubMed:19737099}.
CC -!- INDUCTION: Expression is positively regulated by the depudecin
CC biosynthesis cluster-specific transcription activator DEP6
CC (PubMed:19737099). {ECO:0000269|PubMed:19737099}.
CC -!- DISRUPTION PHENOTYPE: Impairs the production of depudecin and
CC accumulates an epoxide-containing metabolite of slightly higher
CC retention factor than native depudecin (PubMed:19737099).
CC {ECO:0000269|PubMed:19737099}.
CC -!- SIMILARITY: Belongs to the FAD-binding monooxygenase family.
CC {ECO:0000305}.
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DR EMBL; FJ977165; ACZ57547.1; -; Genomic_DNA.
DR AlphaFoldDB; D2E9W9; -.
DR SMR; D2E9W9; -.
DR PHI-base; PHI:2378; -.
DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.50.50.60; -; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR SUPFAM; SSF51905; SSF51905; 2.
PE 2: Evidence at transcript level;
KW FAD; Flavoprotein; Monooxygenase; NADP; Oxidoreductase.
FT CHAIN 1..581
FT /note="FAD-dependent monooxygenase DEP4"
FT /id="PRO_0000441941"
FT BINDING 43..46
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 54..56
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 108
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 183..202
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 219..220
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 351..352
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
FT BINDING 470
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:Q47PU3"
SQ SEQUENCE 581 AA; 66051 MW; 761A4F00443A41BC CRC64;
MESFDIVVVG AGWYGLMAAR TYLELAPETN LLIVDDSSTV GGVWSKERIY PSLFAQISHP
LFEYSFYPMP KDDISPDGFV SGKTIHNYLT SFTRDHNLLP RLRLNTRVER VRRGPSDAGG
WVLDIKEGNP LLCHKLIYAT GANSSPIIPT WPRQTFEQPV IHSLDLGKHQ DYIAKSVETA
TVVGRSKSSY DAVYHLLCEG KRVNWVMRDG LSGPFSLYAP TFMGLWNIAD HISTRFASSF
SPCIMNTSGF CYNFLQRNAV GRTLTNVYWR AANYLSVSHA EYWRTPNAEK LRPRPYSDGV
FWGSGGIGIA TAPDFWKVFH RGNITIHSTE IDSLSHGDVV NLKNGYSLAT DIVIHCTGFD
KGYTTFDPEL REELGLQYNS KSISRWSLLD AKAEQTVDEL LPYLRTAPLQ DMDPDASSRP
EQGPNRHFRR LVVPELAARG DRSILFPGHI HSAFTPLAAE LQALWGVSWM LGWRELPPQE
EMELEAATFN AWTRKRYLEQ GKKHSYFIYD YIPYIDTLMR DLGLNPYRKS SVFEEWFVRY
KPSDYGTILD EYRDIRRLSL ECLQGTGGFA ERTNGHGVNM K