DERL2_PONAB
ID DERL2_PONAB Reviewed; 239 AA.
AC Q5RC74;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 91.
DE RecName: Full=Derlin-2 {ECO:0000305};
DE AltName: Full=Der1-like protein 2 {ECO:0000250|UniProtKB:Q9GZP9};
GN Name=DERL2 {ECO:0000250|UniProtKB:Q9GZP9};
OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain cortex;
RG The German cDNA consortium;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functional component of endoplasmic reticulum-associated
CC degradation (ERAD) for misfolded lumenal glycoproteins, but not that of
CC misfolded nonglycoproteins. May act by forming a channel that allows
CC the retrotranslocation of misfolded glycoproteins into the cytosol
CC where they are ubiquitinated and degraded by the proteasome. May
CC mediate the interaction between VCP and misfolded glycoproteins. May
CC also be involved in endoplasmic reticulum stress-induced pre-emptive
CC quality control, a mechanism that selectively attenuates the
CC translocation of newly synthesized proteins into the endoplasmic
CC reticulum and reroutes them to the cytosol for proteasomal degradation.
CC {ECO:0000250|UniProtKB:Q9GZP9}.
CC -!- SUBUNIT: Forms homo- and heterooligomers with DERL3 and, to a lesser
CC extent, with DERL1. Interacts with the SEL1L/SYVN1 and VCP/SELENOS
CC protein complexes. Mediates association between VCP and EDEM1, as well
CC as that between VCP and the misfolded glycoproteins. Interacts with
CC OS9. Interacts with SELENOK and SELENOS. Interacts with the signal
CC recognition particle/SRP and the SRP receptor; in the process of
CC endoplasmic reticulum stress-induced pre-emptive quality control.
CC Interacts with CCDC47 (By similarity). {ECO:0000250|UniProtKB:Q8BNI4,
CC ECO:0000250|UniProtKB:Q9GZP9}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000250|UniProtKB:Q9GZP9}; Multi-pass membrane protein
CC {ECO:0000250|UniProtKB:Q9GZP9}.
CC -!- SIMILARITY: Belongs to the derlin family. {ECO:0000305}.
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DR EMBL; CR858406; CAH90633.1; -; mRNA.
DR RefSeq; NP_001127312.1; NM_001133840.2.
DR AlphaFoldDB; Q5RC74; -.
DR SMR; Q5RC74; -.
DR STRING; 9601.ENSPPYP00000008861; -.
DR Ensembl; ENSPPYT00000009224; ENSPPYP00000008861; ENSPPYG00000007872.
DR GeneID; 100174373; -.
DR KEGG; pon:100174373; -.
DR CTD; 51009; -.
DR eggNOG; KOG0858; Eukaryota.
DR GeneTree; ENSGT00530000063156; -.
DR HOGENOM; CLU_051898_5_2_1; -.
DR InParanoid; Q5RC74; -.
DR OMA; WSRKNPD; -.
DR OrthoDB; 1609512at2759; -.
DR TreeFam; TF314715; -.
DR Proteomes; UP000001595; Chromosome 17.
DR GO; GO:0005769; C:early endosome; IEA:Ensembl.
DR GO; GO:0030176; C:integral component of endoplasmic reticulum membrane; ISS:UniProtKB.
DR GO; GO:0005770; C:late endosome; IEA:Ensembl.
DR GO; GO:0005047; F:signal recognition particle binding; ISS:UniProtKB.
DR GO; GO:0030968; P:endoplasmic reticulum unfolded protein response; ISS:UniProtKB.
DR GO; GO:1904153; P:negative regulation of retrograde protein transport, ER to cytosol; IEA:Ensembl.
DR GO; GO:0030307; P:positive regulation of cell growth; ISS:UniProtKB.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; ISS:UniProtKB.
DR GO; GO:0030970; P:retrograde protein transport, ER to cytosol; ISS:UniProtKB.
DR GO; GO:0001967; P:suckling behavior; IEA:Ensembl.
DR GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; ISS:UniProtKB.
DR InterPro; IPR007599; DER1.
DR InterPro; IPR035952; Rhomboid-like_sf.
DR Pfam; PF04511; DER1; 1.
DR SUPFAM; SSF144091; SSF144091; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..239
FT /note="Derlin-2"
FT /id="PRO_0000219047"
FT TOPO_DOM 1..56
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 57..77
FT /note="Helical; Name=1"
FT /evidence="ECO:0000255"
FT TOPO_DOM 78..98
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 99..119
FT /note="Helical; Name=2"
FT /evidence="ECO:0000255"
FT TOPO_DOM 120..150
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 151..171
FT /note="Helical; Name=3"
FT /evidence="ECO:0000255"
FT TOPO_DOM 172
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 173..193
FT /note="Helical; Name=4"
FT /evidence="ECO:0000255"
FT TOPO_DOM 194..239
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 215..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 27567 MW; CAA228487C3CCB5C CRC64;
MAYQSLRLEY LQIPPVSRAY TTACVLTTAA VQLELITPFQ LYFNPELIFK HFQIWRLITN
FLFFGPVGFN FLFNMIFLYR YCRMLEEGSF RGRTADFVFM FLFGGFLMTL FGLFVSLVFL
GQAFTIMLVY VWSRRNPYVR MNFFGLLNFQ APFLPWVLMG FSLLLGNSII VDLLGIAVGH
IYFFLEDVFP NQPGGIRILK TPSILKAIFD TPDEDPNYNP LPEERPGGFA WGEGQRLGG