DERR_XENTR
ID DERR_XENTR Reviewed; 350 AA.
AC Q66KL4; Q28D13;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Derriere protein;
DE AltName: Full=Growth/differentiation factor 3;
DE Short=Gdf-3;
DE Flags: Precursor;
GN Name=derriere {ECO:0000250|UniProtKB:Q9YGV1};
GN Synonyms=gdf3 {ECO:0000312|EMBL:AAH80341.1}; ORFNames=TGas141f11.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1] {ECO:0000305, ECO:0000312|EMBL:AAH80341.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Tail bud {ECO:0000312|EMBL:AAH80341.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000305, ECO:0000312|EMBL:AAH80341.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 108-350.
RC TISSUE=Gastrula {ECO:0000312|EMBL:CAJ81634.1};
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for posterior mesoderm formation during
CC embryogenesis. Acts indirectly to suppress head formation by altering
CC mesodermal patterning. Also involved in the establishment of left-right
CC axis asymmetry, acting upstream of nodal/nr-1. Can exert long-range
CC effects in the embryo (By similarity). {ECO:0000250|UniProtKB:Q9YGV1}.
CC -!- SUBUNIT: Homodimer; disulfide-linked. Also forms heterodimers with
CC other TGF-beta family members including nodal2/nr-2 and bmp4 (By
CC similarity). {ECO:0000250|UniProtKB:Q9YGV1}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TGF-beta family. {ECO:0000255}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC080341; AAH80341.1; -; mRNA.
DR EMBL; CR855767; CAJ81634.1; -; mRNA.
DR RefSeq; NP_001007905.1; NM_001007904.1.
DR AlphaFoldDB; Q66KL4; -.
DR SMR; Q66KL4; -.
DR STRING; 8364.ENSXETP00000004454; -.
DR PaxDb; Q66KL4; -.
DR DNASU; 493288; -.
DR GeneID; 493288; -.
DR KEGG; xtr:493288; -.
DR CTD; 9573; -.
DR Xenbase; XB-GENE-487309; gdf3.
DR eggNOG; KOG3900; Eukaryota.
DR HOGENOM; CLU_020515_4_0_1; -.
DR InParanoid; Q66KL4; -.
DR OrthoDB; 919690at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005576; C:extracellular region; ISS:UniProtKB.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0005125; F:cytokine activity; IBA:GO_Central.
DR GO; GO:0008083; F:growth factor activity; IEA:UniProtKB-KW.
DR GO; GO:0016015; F:morphogen activity; ISS:UniProtKB.
DR GO; GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
DR GO; GO:0009952; P:anterior/posterior pattern specification; ISS:UniProtKB.
DR GO; GO:0030509; P:BMP signaling pathway; IBA:GO_Central.
DR GO; GO:0007368; P:determination of left/right symmetry; ISS:UniProtKB.
DR GO; GO:0001707; P:mesoderm formation; ISS:UniProtKB.
DR GO; GO:0010862; P:positive regulation of pathway-restricted SMAD protein phosphorylation; IBA:GO_Central.
DR GO; GO:0060395; P:SMAD protein signal transduction; IBA:GO_Central.
DR Gene3D; 2.10.90.10; -; 1.
DR InterPro; IPR029034; Cystine-knot_cytokine.
DR InterPro; IPR001839; TGF-b_C.
DR InterPro; IPR001111; TGF-b_propeptide.
DR InterPro; IPR015615; TGF-beta-rel.
DR InterPro; IPR017948; TGFb_CS.
DR PANTHER; PTHR11848; PTHR11848; 1.
DR Pfam; PF00019; TGF_beta; 1.
DR Pfam; PF00688; TGFb_propeptide; 1.
DR SMART; SM00204; TGFB; 1.
DR SUPFAM; SSF57501; SSF57501; 1.
DR PROSITE; PS00250; TGF_BETA_1; 1.
DR PROSITE; PS51362; TGF_BETA_2; 1.
PE 2: Evidence at transcript level;
KW Cleavage on pair of basic residues; Cytokine; Developmental protein;
KW Disulfide bond; Glycoprotein; Growth factor; Reference proteome; Secreted;
KW Signal.
FT SIGNAL 1..16
FT /evidence="ECO:0000255"
FT PROPEP 17..236
FT /evidence="ECO:0000255"
FT /id="PRO_0000274251"
FT CHAIN 237..350
FT /note="Derriere protein"
FT /evidence="ECO:0000255"
FT /id="PRO_0000274252"
FT CARBOHYD 171
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 202
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 249..315
FT /evidence="ECO:0000250|UniProtKB:P09534"
FT DISULFID 278..347
FT /evidence="ECO:0000250|UniProtKB:P09534"
FT DISULFID 282..349
FT /evidence="ECO:0000250|UniProtKB:P09534"
FT DISULFID 314
FT /note="Interchain"
FT /evidence="ECO:0000250|UniProtKB:P09534"
FT CONFLICT 108..109
FT /note="NK -> RG (in Ref. 2; CAJ81634)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 350 AA; 39881 MW; B042A540179C1ABF CRC64;
MLSLACFFSF LLMVKSSPLT FQERMLLKAL GLNTRPNPIA PGPVPKSLRD IFEKGINKDN
PCMMEGFGVP GNIVRSYRDQ GPVAAMEEPQ ESLCLKKFLF FDLSAVENKE QLTLGQLEIK
FKHNSYYGQQ FHLRLYRTLQ LSLKGMRESK MNRKLLVSQS FRLLHKSLYF NLTKVAKDWK
TPEKNMGLLL EIYASSKLAG DNRSFAVCEP IQSFIYTSLL TVSLDPSSCK TPRAKRSTHS
SPPTPSNICK KRRLYIDFKD VGWQNWVIAP RGYMANYCYG ECPYPLTEML RGTNHAVLQT
LVHSVEPEST PLPCCAPTKL SPISMLYYDN NDNVVLRHYE DMVVDECGCK